The Rockefeller University
Laboratory of Molecular Neuro-Oncology
RU Home  >  Research  >  Laboratory of Molecular Neuro-Oncology  >  Ago-miRNA-mRNA ternary map by HITS-CLIP



Brain Argonaute ternary map (mm9)
Enter a key word:
Select an miRNA:
Cluster Height: >=
BC: >=
Sort by:  
then by:  
then by:  
Page 9 of 157 Showing rows 801 - 900 (15663 total)
<   | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10   >   Next Block
chr7 130337080 130337086 + miR-27 5 2 PEAK4823 3UTR EXN12 AK044679 Tnrc6a trinucleotide repeat containing 6A
chr7 130337093 130337099 + miR-27 5 2 PEAK4823 3UTR EXN12 AK044679 Tnrc6a trinucleotide repeat containing 6A
chr7 149069286 149069292 - miR-124 2 2 PEAK4900 3UTR EXN6 NM_023764 Tollip toll interacting protein
chr2 30814046 30814053 + miR-124 4 2 PEAK959 3UTR EXN5 NM_133673 Tor1b torsin family 1 member B
chr3 8930885 8930891 - miR-26 3 2 PEAK1794 3UTR EXN7 NM_001025263 Tpd52 tumor protein D52 isoform 3
chr3 8930870 8930876 - miR-125 3 2 PEAK1794 3UTR EXN7 NM_001025263 Tpd52 tumor protein D52 isoform 3
chr3 8930906 8930912 - miR-181 3 2 PEAK1794 3UTR EXN7 NM_001025263 Tpd52 tumor protein D52 isoform 3
chr3 8930919 8930925 - miR-9 3 2 PEAK1794 3UTR EXN7 NM_001025263 Tpd52 tumor protein D52 isoform 3
chr3 8930958 8930964 - miR-138 2 2 PEAK1795 3UTR EXN7 NM_001025263 Tpd52 tumor protein D52 isoform 3
chr3 8931011 8931017 - miR-15 2 2 PEAK1795 3UTR EXN7 NM_001025263 Tpd52 tumor protein D52 isoform 3
chr8 74675665 74675671 + miR-181 3 2 PEAK5225 CDS EXN8 NM_001001491 Tpm4 tropomyosin 4
chr8 74675712 74675718 + miR-101 3 2 PEAK5225 CDS EXN8 NM_001001491 Tpm4 tropomyosin 4
chr6 85874407 85874413 + miR-181 2 2 PEAK4040 CDS EXN3 BC027413 Tprkb Tp53rk binding protein
chr1 59003126 59003132 - let-7 2 2 PEAK143 CDS EXN2 AK036650 Trak2 trafficking protein kinesin binding 2
chr1 59003076 59003083 - miR-17 2 2 PEAK143 CDS ITN3 AK036650 Trak2 trafficking protein kinesin binding 2
chr16 4065332 4065338 - miR-124 3 2 PEAK9844 CDS EXN4 NM_026508 Trap1 TNF receptor-associated protein 1
chr16 4065340 4065346 - miR-193 3 2 PEAK9844 CDS EXN4 NM_026508 Trap1 TNF receptor-associated protein 1
chr9 44211996 44212004 - miR-26 2 2 PEAK5623 3UTR EXN4 AK005276 Trappc4 Adult male cerebellum cDNA RIKEN full-length enriched library clone:1500017G03 product:synbindin full insert sequence.
chr10 113836302 113836309 - let-7 3 2 PEAK7022 3UTR EXN19 NM_146241 Trhde TRH-degrading enzyme
chr10 113836309 113836315 - miR-30 3 2 PEAK7022 3UTR EXN19 NM_146241 Trhde TRH-degrading enzyme
chr10 113836311 113836317 - miR-181 3 2 PEAK7022 3UTR EXN19 NM_146241 Trhde TRH-degrading enzyme
chr5 115793126 115793134 + miR-125 2 2 PEAK3500 3UTR EXN2 NM_026933 Triap1 p53-inducible cell-survival factor
chr7 112766319 112766325 - miR-708 2 2 PEAK4749 CDS EXN6 BC034263 Trim3 tripartite motif protein 3
chr19 46590854 46590860 + miR-17 5 2 PEAK11403 3UTR EXN6 NM_053100 Trim8 tripartite motif protein 8
chr15 27661476 27661483 - miR-34 3 2 PEAK9405 3UTR EXN57 NM_001081302 Trio triple functional domain (PTPRF interacting)
chr15 27661498 27661504 - miR-26 3 2 PEAK9405 3UTR EXN57 NM_001081302 Trio triple functional domain (PTPRF interacting)
chr1 84721289 84721295 - miR-27 6 2 PEAK268 CDS EXN41 NM_133975 Trip12 thyroid hormone receptor interactor 12
chr1 84735322 84735329 - miR-26 3 2 PEAK269 CDS EXN32 NM_133975 Trip12 thyroid hormone receptor interactor 12
chr1 84735330 84735336 - miR-9 3 2 PEAK269 CDS EXN32 NM_133975 Trip12 thyroid hormone receptor interactor 12
chr1 84735333 84735339 - miR-153 3 2 PEAK269 CDS EXN32 NM_133975 Trip12 thyroid hormone receptor interactor 12
chr9 65712134 65712140 - miR-15 2 2 PEAK5799 CDS EXN10 NM_019797 Trip4 thyroid hormone receptor interactor 4
chr9 65712152 65712158 - miR-9 2 2 PEAK5799 CDS EXN10 NM_019797 Trip4 thyroid hormone receptor interactor 4
chrX 147084165 147084171 - miR-15 4 2 PEAK6479 CDS EXN12 NM_019548 Tro trophinin isoform 3
chrX 147084175 147084182 - miR-9 4 2 PEAK6479 CDS EXN12 NM_019548 Tro trophinin isoform 3
chr1 145604250 145604256 - miR-26 2 2 PEAK480 3UTR EXN9 NM_013835 Trove2 TROVE domain family member 2
chr2 121024121 121024127 - miR-15 2 2 PEAK1401 3UTR EXN27 BC079906 Trp53bp1 transformation related protein 53 binding
chr2 166621547 166621553 + miR-26 3 2 PEAK1721 3UTR EXN2 NM_023815 Trp53rk Nori-2 protein
chr9 95621592 95621598 - miR-138 3 2 PEAK5983 CDS EXN7 NM_011643 Trpc1 transient receptor potential cation channel
chr2 126655864 126655871 - miR-9 4 2 PEAK1461 CDS EXN15 NM_021450 Trpm7 transient receptor potential cation channel
chr2 126674323 126674329 - miR-9 4 2 PEAK1462 CDS EXN6 AK162483 ChaK Mus musculus transient receptor potential-related protein (ChaK) mRNA complete cds.
chr2 126674290 126674297 - miR-19 4 2 PEAK1462 CDS EXN6 AK162483 ChaK Mus musculus transient receptor potential-related protein (ChaK) mRNA complete cds.
chr2 126674307 126674313 - miR-344 4 2 PEAK1462 CDS EXN6 AK162483 ChaK Mus musculus transient receptor potential-related protein (ChaK) mRNA complete cds.
chr15 50487985 50487993 - miR-9 2 2 PEAK9483
chr15 50490982 50490989 - miR-125 3 2 PEAK9484
chr15 50490983 50490990 - miR-125 3 2 PEAK9484
chr15 50491001 50491008 - miR-708 4 2 PEAK9485
chr5 145552172 145552179 + miR-9 7 2 PEAK3720 CDS EXN16 NM_001081362 Trrap transformation/transcription domain-associated
chr5 145552187 145552193 + miR-30 7 2 PEAK3720 CDS EXN16 NM_001081362 Trrap transformation/transcription domain-associated
chr2 120563669 120563675 - miR-101 2 2 PEAK1392 3UTR EXN16 NM_080788 Ttbk2 tau tubulin kinase 2 isoform 1
chr17 75139063 75139069 + miR-15 3 2 PEAK10547 CDS EXN5 BC021912 Ttc27 tetratricopeptide repeat domain 27
chr17 75139052 75139058 + miR-193 3 2 PEAK10547 CDS EXN5 BC021912 Ttc27 tetratricopeptide repeat domain 27
chr17 75139060 75139066 + miR-101 3 2 PEAK10547 CDS EXN5 BC021912 Ttc27 tetratricopeptide repeat domain 27
chr4 82873149 82873155 - miR-101 3 2 PEAK2629 CDS ITN20 NM_027238 1810054D07Rik hypothetical protein LOC69863
chr1 74726160 74726166 + miR-15 3 2 PEAK219 CDS EXN3 NM_001014974 Ttll4 tubulin tyrosine ligase-like family member 4
chr1 74726167 74726175 + miR-125 3 2 PEAK219 CDS EXN3 NM_001014974 Ttll4 tubulin tyrosine ligase-like family member 4
chr5 141099222 141099228 - miR-193 2 2 PEAK3670 3UTR EXN14 NM_175274 Ttyh3 tweety 3
chr5 141099214 141099221 - miR-27 2 2 PEAK3670 3UTR EXN14 NM_175274 Ttyh3 tweety 3
chr5 141099170 141099177 - miR-138 2 2 PEAK3670 3UTR EXN14 NM_175274 Ttyh3 tweety 3
chr5 141099175 141099181 - miR-34 2 2 PEAK3670 3UTR EXN14 NM_175274 Ttyh3 tweety 3
chr5 141099229 141099235 - miR-708 2 2 PEAK3670 3UTR EXN14 NM_175274 Ttyh3 tweety 3
chr13 34166425 34166431 - miR-181 6 2 PEAK8573 CDS EXN4 NM_009450 Tubb2a tubulin beta 2
chr13 34166512 34166520 - miR-34 5 2 PEAK8574 CDS EXN4 NM_009450 Tubb2a tubulin beta 2
chr17 66273093 66273099 - miR-30 2 2 PEAK10523 3UTR EXN5 NM_023053 Twsg1 twisted gastrulation homolog 1
chr4 129305474 129305480 - miR-19 3 2 PEAK2874 3UTR EXN11 AK141252 Txlna taxilin alpha
chr4 129305486 129305492 - miR-124 3 2 PEAK2874 3UTR EXN11 AK141252 Txlna taxilin alpha
chr4 129305502 129305508 - miR-124 3 2 PEAK2874 3UTR EXN11 AK141252 Txlna taxilin alpha
chr4 57956750 57956757 - miR-138 5 2 PEAK2544 3UTR EXN5 NM_011660 Txn1 thioredoxin 1
chr4 57956800 57956806 - miR-26 5 2 PEAK2544 CDS EXN5 NM_011660 Txn1 thioredoxin 1
chr13 38593201 38593207 - miR-19 3 2 PEAK8590 3UTR EXN10 AK225019 Txndc5 thioredoxin domain containing 5
chr1 38054012 38054018 - miR-27 2 2 PEAK93 5UTR EXN1 AK011424 Txndc9 thioredoxin domain containing 9
chr1 38054032 38054038 - miR-15 2 2 PEAK93 5UTR EXN1 AK011424 Txndc9 thioredoxin domain containing 9
chr18 80409138 80409145 + miR-15 3 2 PEAK11067 3UTR EXN4 AK184254 Txnl4 10 days embryo whole body cDNA RIKEN full-length enriched library clone:2610037O14 product:similar to N-TERMINAL ACETYLTRANSFERASE COMPLEX ARD1 SUBUNIT HOMOLOG (Hypothetical protein) (ES cells cDNA RIKEN full-length enriched library clone:2410026O16 produ
chr18 80409147 80409154 + miR-101 3 2 PEAK11067 3UTR EXN4 AK184254 Txnl4 10 days embryo whole body cDNA RIKEN full-length enriched library clone:2610037O14 product:similar to N-TERMINAL ACETYLTRANSFERASE COMPLEX ARD1 SUBUNIT HOMOLOG (Hypothetical protein) (ES cells cDNA RIKEN full-length enriched library clone:2410026O16 produ
chr18 80409158 80409164 + miR-27 3 2 PEAK11067 3UTR EXN4 AK184254 Txnl4 10 days embryo whole body cDNA RIKEN full-length enriched library clone:2610037O14 product:similar to N-TERMINAL ACETYLTRANSFERASE COMPLEX ARD1 SUBUNIT HOMOLOG (Hypothetical protein) (ES cells cDNA RIKEN full-length enriched library clone:2410026O16 produ
chr3 89821093 89821099 - miR-708 4 2 PEAK2024 CDS EXN18 AK030218 Ubap2l Nice-4 protein homolog isoform 1
chr11 51799275 51799281 - let-7 3 2 PEAK7369 3UTR EXN6 NM_009458 Ube2b ubiquitin-conjugating enzyme E2B RAD6 homology
chr11 51799247 51799253 - miR-30 3 2 PEAK7369 3UTR EXN6 NM_009458 Ube2b ubiquitin-conjugating enzyme E2B RAD6 homology
chr11 51799252 51799258 - let-7 3 2 PEAK7369 3UTR EXN6 NM_009458 Ube2b ubiquitin-conjugating enzyme E2B RAD6 homology
chr11 51799291 51799298 - miR-26 3 2 PEAK7369 3UTR EXN6 NM_009458 Ube2b ubiquitin-conjugating enzyme E2B RAD6 homology
chr11 51799283 51799289 - miR-19 3 2 PEAK7369 3UTR EXN6 NM_009458 Ube2b ubiquitin-conjugating enzyme E2B RAD6 homology
chr1 93182356 93182362 + miR-19 2 2 PEAK291 3UTR EXN11 BC016117 Ube2f NEDD8-conjugating enzyme
chr1 93182392 93182398 + let-7 2 2 PEAK291 3UTR EXN11 BC016117 Ube2f NEDD8-conjugating enzyme
chr1 93182381 93182388 + miR-181 2 2 PEAK291 3UTR EXN11 BC016117 Ube2f NEDD8-conjugating enzyme
chr1 93182396 93182402 + miR-344 2 2 PEAK291 3UTR EXN11 BC016117 Ube2f NEDD8-conjugating enzyme
chr1 93182401 93182407 + miR-27 2 2 PEAK291 3UTR EXN11 BC016117 Ube2f NEDD8-conjugating enzyme
chr9 55053858 55053865 + miR-21 2 2 PEAK5696 3UTR EXN13 NM_180600 Ube2q2 ubiquitin-conjugating enzyme E2Q 2
chr9 55053907 55053914 + miR-344 2 2 PEAK5696 3UTR EXN13 NM_180600 Ube2q2 ubiquitin-conjugating enzyme E2Q 2
chr11 95917225 95917232 - miR-181 5 2 PEAK7841 CDS EXN5 NM_172300 Ube2z ubiquitin-conjugating enzyme E2Z
chr9 44732436 44732442 - miR-181 2 2 PEAK5633 3UTR EXN20 AK172893 Ube4a MKIAA0126 protein (Fragment).
chr4 148727101 148727107 - miR-193 4 2 PEAK3011 3UTR ITN2 AK020898 AK020898 Mus musculus adult retina cDNA RIKEN full-length enriched library clone:A930028C08 product:unclassifiable full insert sequence.
chr7 129223089 129223095 + miR-17 3 2 PEAK4809 3UTR EXN7 NM_138589 Ubfd1 ubiquitin family domain containing 1
chr7 129223118 129223124 + miR-708 3 2 PEAK4809 3UTR EXN7 NM_138589 Ubfd1 ubiquitin family domain containing 1
chr5 149317033 149317039 - miR-27 3 2 PEAK3766 3UTR EXN7 BC043729 Ubl3 ubiquitin-like 3
chr5 149317055 149317061 - miR-124 3 2 PEAK3766 3UTR EXN7 BC043729 Ubl3 ubiquitin-like 3
chr6 38448924 38448931 + miR-15 4 2 PEAK3881 CDS ITN14 BC043095 D130059P03Rik hypothetical protein LOC320538
chr6 38448883 38448891 + let-7 4 2 PEAK3881 CDS ITN14 BC043095 D130059P03Rik hypothetical protein LOC320538
chr15 37933878 37933884 - miR-138 6 2 PEAK9463 CDS EXN31 NM_001081359 Ubr5 extraembryonic development protein
chr3 53661850 53661857 - miR-15 3 2 PEAK1890 CDS EXN6 NM_026435 Ufm1 ubiquitin-fold modifier 1
chr5 115572980 115572987 - miR-193 4 2 PEAK3493 3UTR EXN5 NM_175352 Unc119b unc-119 homolog B
chr5 115572975 115572981 - miR-26 4 2 PEAK3493 3UTR EXN5 NM_175352 Unc119b unc-119 homolog B
Page 9 of 157 Showing rows 801 - 900 (15663 total)
<   | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10   >   Next Block

Get the whole table