The Rockefeller University
Laboratory of Molecular Neuro-Oncology
RU Home  >  Research  >  Laboratory of Molecular Neuro-Oncology  >  Ago-miRNA-mRNA ternary map by HITS-CLIP



Brain Argonaute ternary map (mm9)
Enter a key word:
Select an miRNA:
Cluster Height: >=
BC: >=
Sort by:  
then by:  
then by:  
Page 8 of 157 Showing rows 701 - 800 (15663 total)
<   | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10   >   Next Block
chr11 55208581 55208587 - miR-138 8 3 PEAK7413 3UTR EXN10 AK049692 Sparc secreted acidic cysteine rich glycoprotein
chr11 55208599 55208605 - miR-27 8 3 PEAK7413 3UTR EXN10 AK049692 Sparc secreted acidic cysteine rich glycoprotein
chr11 55208243 55208249 - miR-344 14 5 PEAK7412 3UTR EXN10 AK049692 Sparc secreted acidic cysteine rich glycoprotein
chr11 55208067 55208073 - miR-153 14 5 PEAK7410 3UTR EXN10 AK049692 Sparc secreted acidic cysteine rich glycoprotein
chr11 55208048 55208054 - miR-27 14 5 PEAK7410 3UTR EXN10 AK049692 Sparc secreted acidic cysteine rich glycoprotein
chr11 55208084 55208090 - miR-15 14 5 PEAK7410 3UTR EXN10 AK049692 Sparc secreted acidic cysteine rich glycoprotein
chr5 104542553 104542560 - miR-181 26 5 PEAK3423 3UTR ITN2 AK043904 AK043904 Mus musculus 10 days neonate cortex cDNA RIKEN full-length enriched library clone:A830049A06 product:unclassifiable full insert sequence.
chr2 167306941 167306947 - miR-181 4 3 PEAK1731 3UTR EXN3 NM_170756 Spata2 spermatogenesis associated 2
chr2 167306976 167306982 - miR-19 4 3 PEAK1731 3UTR EXN3 NM_170756 Spata2 spermatogenesis associated 2
chr12 77682516 77682523 - miR-9 8 3 PEAK8315 3UTR EXN36 NM_013675 Spnb1 spectrin beta 1
chr12 77682503 77682509 - miR-125 8 3 PEAK8315 3UTR EXN36 NM_013675 Spnb1 spectrin beta 1
chr4 141024229 141024236 - miR-30 4 3 PEAK2959 3UTR EXN16 NM_019763 Spen SPEN homolog transcriptional regulator
chr8 55607812 55607818 - miR-708 3 2 PEAK5095 3UTR EXN6 NM_029701 Spcs3 signal peptidase complex subunit 3
chr8 55607801 55607807 - miR-30 3 2 PEAK5095 3UTR EXN6 NM_029701 Spcs3 signal peptidase complex subunit 3
chr8 55607229 55607236 - miR-30 9 3 PEAK5094 3UTR EXN6 NM_029701 Spcs3 signal peptidase complex subunit 3
chr8 55607264 55607271 - miR-30 9 3 PEAK5094 3UTR EXN6 NM_029701 Spcs3 signal peptidase complex subunit 3
chr8 55607225 55607232 - let-7 9 3 PEAK5094 3UTR EXN6 NM_029701 Spcs3 signal peptidase complex subunit 3
chr8 55606759 55606765 - miR-101 2 2 PEAK5093 3UTR EXN6 NM_029701 Spcs3 signal peptidase complex subunit 3
chr14 31813240 31813246 - miR-27 3 2 PEAK9016 3UTR EXN4 NM_026911 Spcs1 signal peptidase 12kDa
chr2 167308267 167308273 - miR-138 5 2 PEAK1734 3UTR EXN3 NM_170756 Spata2 spermatogenesis associated 2
chr2 167308265 167308271 - miR-708 5 2 PEAK1734 3UTR EXN3 NM_170756 Spata2 spermatogenesis associated 2
chr2 167307891 167307898 - let-7 6 4 PEAK1733 3UTR EXN3 NM_170756 Spata2 spermatogenesis associated 2
chr2 167307880 167307886 - miR-19 6 4 PEAK1733 3UTR EXN3 NM_170756 Spata2 spermatogenesis associated 2
chr2 167306967 167306973 - miR-19 4 3 PEAK1731 3UTR EXN3 NM_170756 Spata2 spermatogenesis associated 2
chr11 93987359 93987365 + miR-17 6 4 PEAK7818 3UTR EXN2 BC096410 BC096410 Mus musculus cDNA clone IMAGE:1548556.
chr11 93987352 93987358 + miR-181 6 4 PEAK7818 3UTR EXN2 BC096410 BC096410 Mus musculus cDNA clone IMAGE:1548556.
chr11 93986011 93986019 + miR-125 5 3 PEAK7816 3UTR ITN1 BC096410 BC096410 Mus musculus cDNA clone IMAGE:1548556.
chr17 80796156 80796162 - let-7 2 2 PEAK10568 3UTR EXN22 NM_009231 Sos1 son of sevenless 1
chr17 80793936 80793943 - miR-193 7 3 PEAK10567 3UTR EXN22 NM_009231 Sos1 son of sevenless 1
chr17 80793966 80793972 - miR-124 7 3 PEAK10567 3UTR EXN22 NM_009231 Sos1 son of sevenless 1
chr17 80793985 80793992 - miR-27 7 3 PEAK10567 3UTR EXN22 NM_009231 Sos1 son of sevenless 1
chr9 41776660 41776666 - miR-9 7 4 PEAK5597 3UTR EXN48 NM_011436 Sorl1 sortilin-related receptor LDLR class A
chr8 46911675 46911682 + miR-30 14 4 PEAK5071 3UTR EXN23 BC039163 Sorbs2 sorbin and SH3 domain containing 2
chr19 40367353 40367359 - miR-26 4 3 PEAK11325 3UTR EXN24 NM_009166 Sorbs1 sorbin and SH3 domain containing 1 isoform 1
chr19 40366936 40366942 - miR-17 2 2 PEAK11324 3UTR EXN24 NM_009166 Sorbs1 sorbin and SH3 domain containing 1 isoform 1
chr16 91678765 91678771 + miR-30 5 3 PEAK10135 3UTR EXN2 BC029990 mKIAA1019 Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA RIKEN full-length enriched library clone:9430093K11 product:SON PROTEIN homolog [Mus musculus] full insert sequence.
chr16 91678735 91678741 + miR-30 5 3 PEAK10135 3UTR EXN2 BC029990 mKIAA1019 Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA RIKEN full-length enriched library clone:9430093K11 product:SON PROTEIN homolog [Mus musculus] full insert sequence.
chr16 91678744 91678751 + miR-30 5 3 PEAK10135 3UTR EXN2 BC029990 mKIAA1019 Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA RIKEN full-length enriched library clone:9430093K11 product:SON PROTEIN homolog [Mus musculus] full insert sequence.
chr16 91658880 91658886 + miR-138 7 4 PEAK10133 3UTR EXN1 AK122418 Son Son cell proliferation protein truncated
chr11 97257492 97257499 + miR-21 6 3 PEAK7864 3UTR EXN10 NM_138657 Socs7 suppressor of cytokine signaling 7
chr11 97257459 97257466 + miR-101 6 3 PEAK7864 3UTR EXN10 NM_138657 Socs7 suppressor of cytokine signaling 7
chr17 87536493 87536500 + miR-9 5 4 PEAK10627 3UTR EXN3 NM_019654 Socs5 suppressor of cytokine signaling 5
chr17 80796169 80796175 - miR-708 2 2 PEAK10568 3UTR EXN22 NM_009231 Sos1 son of sevenless 1
chr12 28021211 28021217 - miR-9 6 2 PEAK8159 3UTR EXN1 NM_009234 Sox11 SRY-box 11
chr12 28021233 28021240 - miR-27 6 2 PEAK8159 3UTR EXN1 NM_009234 Sox11 SRY-box 11
chr15 102266172 102266179 + miR-124 15 5 PEAK9822 3UTR EXN6 NM_013672 Sp1 trans-acting transcription factor 1
chr15 102266169 102266175 + miR-27 15 5 PEAK9822 3UTR EXN6 NM_013672 Sp1 trans-acting transcription factor 1
chr15 102266153 102266159 + miR-124 15 5 PEAK9822 3UTR EXN6 NM_013672 Sp1 trans-acting transcription factor 1
chr11 112647785 112647791 + miR-124 12 3 PEAK8006 3UTR EXN3 NM_011448 Sox9 SRY-box containing gene 9
chr11 112647798 112647804 + miR-15 12 3 PEAK8006 3UTR EXN3 NM_011448 Sox9 SRY-box containing gene 9
chr2 181404647 181404653 - miR-15 2 2 PEAK1776 3UTR EXN2 NM_009236 Sox18 SRY-box containing gene 18
chr2 181404611 181404617 - miR-17 2 2 PEAK1776 3UTR EXN2 NM_009236 Sox18 SRY-box containing gene 18
chr2 181404623 181404629 - miR-27 2 2 PEAK1776 3UTR EXN2 NM_009236 Sox18 SRY-box containing gene 18
chr12 28025474 28025481 - miR-153 4 3 PEAK8162 3UTR EXN1 NM_009234 Sox11 SRY-box 11
chr12 28025444 28025450 - miR-26 4 3 PEAK8162 3UTR EXN1 NM_009234 Sox11 SRY-box 11
chr12 28025451 28025457 - miR-125 4 3 PEAK8162 3UTR EXN1 NM_009234 Sox11 SRY-box 11
chr12 28025331 28025337 - miR-26 7 3 PEAK8161 3UTR EXN1 NM_009234 Sox11 SRY-box 11
chr12 28025295 28025301 - let-7 7 3 PEAK8161 3UTR EXN1 NM_009234 Sox11 SRY-box 11
chr12 28025292 28025298 - miR-708 7 3 PEAK8161 3UTR EXN1 NM_009234 Sox11 SRY-box 11
chr12 28024875 28024881 - let-7 13 5 PEAK8160 3UTR EXN1 NM_009234 Sox11 SRY-box 11
chr17 87536462 87536468 + miR-26 5 3 PEAK10626 3UTR EXN3 NM_019654 Socs5 suppressor of cytokine signaling 5
chr11 29999447 29999453 - let-7 31 5 PEAK7216 3UTR EXN35 NM_175836 Spnb2 spectrin beta 2 isoform 1
chr10 127729448 127729454 + miR-15 3 3 PEAK7109 3UTR EXN12 BC064827 Stat2 Mus musculus signal transducer and activator of transcription 2 (Stat2) mRNA complete cds.
chr6 72104150 72104157 + miR-15 5 3 PEAK4008 3UTR EXN7 NM_001035228 St3gal5 ST3 beta-galactoside alpha-23-sialyltransferase
chr15 66937468 66937474 - miR-26 3 3 PEAK9551 3UTR EXN9 NM_009177 St3gal1 ST3 beta-galactoside alpha-23-sialyltransferase
chr15 66937477 66937484 - miR-124 3 3 PEAK9551 3UTR EXN9 NM_009177 St3gal1 ST3 beta-galactoside alpha-23-sialyltransferase
chr15 66934552 66934558 - miR-181 2 2 PEAK9550 3UTR EXN9 NM_009177 St3gal1 ST3 beta-galactoside alpha-23-sialyltransferase
chr15 66934531 66934538 - miR-125 2 2 PEAK9550 3UTR EXN9 NM_009177 St3gal1 ST3 beta-galactoside alpha-23-sialyltransferase
chr15 81195858 81195864 - miR-181 7 4 PEAK9680 3UTR EXN12 NM_133726 St13 suppression of tumorigenicity 13
chr2 79512708 79512714 + miR-181 5 3 PEAK1232 3UTR EXN16 AK037213 Ssfa2 sperm specific antigen 2
chr2 79512700 79512706 + miR-27 5 3 PEAK1232 3UTR EXN16 AK037213 Ssfa2 sperm specific antigen 2
chr2 79512705 79512712 + miR-26 5 3 PEAK1232 3UTR EXN16 AK037213 Ssfa2 sperm specific antigen 2
chr2 79512730 79512737 + miR-21 5 3 PEAK1232 3UTR EXN16 AK037213 Ssfa2 sperm specific antigen 2
chr8 73121474 73121480 - let-7 4 3 PEAK5209 3UTR EXN16 AK004835 Ssbp4 Mus musculus adult male lung cDNA RIKEN full-length enriched library clone:1210002E11 product:SINGLE STRANDED DNA BINDING PROTEIN-3 homolog [Homo sapiens] full insert sequence.
chr11 74721282 74721288 - miR-221 2 2 PEAK7586 3UTR EXN9 NM_013761 Srr serine racemase
chr11 74720771 74720777 - miR-21 4 3 PEAK7585 3UTR EXN9 NM_013761 Srr serine racemase
chr11 74720742 74720748 - miR-15 4 3 PEAK7585 3UTR EXN9 NM_013761 Srr serine racemase
chr11 74720764 74720770 - miR-153 4 3 PEAK7585 3UTR EXN9 NM_013761 Srr serine racemase
chr18 64431504 64431510 + miR-9 50 5 PEAK11006 3UTR EXN4 NM_009182 St8sia3 ST8 alpha-N-acetyl-neuraminide
chr18 64435453 64435459 + miR-27 5 5 PEAK11007 3UTR EXN4 NM_009182 St8sia3 ST8 alpha-N-acetyl-neuraminide
chr1 97485716 97485724 - miR-26 4 3 PEAK347 3UTR EXN6 NM_009183 St8sia4 ST8 alpha-N-acetyl-neuraminide
chr10 127729439 127729445 + miR-124 3 3 PEAK7109 3UTR EXN12 BC064827 Stat2 Mus musculus signal transducer and activator of transcription 2 (Stat2) mRNA complete cds.
chr10 127729404 127729411 + miR-124 3 3 PEAK7109 3UTR EXN12 BC064827 Stat2 Mus musculus signal transducer and activator of transcription 2 (Stat2) mRNA complete cds.
chr10 127728622 127728628 + let-7 3 4 PEAK7108 3UTR EXN12 BC064827 Stat2 Mus musculus signal transducer and activator of transcription 2 (Stat2) mRNA complete cds.
chr13 19462138 19462145 - let-7 4 3 PEAK8547 3UTR EXN3 AK030365 Stard3nl Mus musculus adult male kidney cDNA RIKEN full-length enriched library clone:0610035N01 product:H_NH1021A08.1 PROTEIN (UNKNOWN) (PROTEIN FOR MGC:14607) (SIMILAR TO STEROIDOGENIC ACUTE REGULATORY PROTEIN RELATED) homolog [Homo sapiens] full insert sequence
chr5 151841441 151841447 - miR-19 2 2 PEAK3779 3UTR EXN14 NM_146258 Stard13 serologically defined colon cancer antigen 13
chr5 151841419 151841425 - miR-138 2 2 PEAK3779 3UTR EXN14 NM_146258 Stard13 serologically defined colon cancer antigen 13
chr2 52548808 52548814 - miR-101 4 3 PEAK1094 3UTR EXN14 NM_019667 Stam2 signal transducing adaptor molecule (SH3 domain
chr2 52548842 52548848 - miR-26 4 3 PEAK1094 3UTR EXN14 NM_019667 Stam2 signal transducing adaptor molecule (SH3 domain
chr11 97898072 97898079 - miR-34 3 2 PEAK7881 3UTR EXN11 NM_146028 Stac2 SH3 and cysteine rich domain 2
chr11 97898061 97898067 - miR-15 3 2 PEAK7881 3UTR EXN11 NM_146028 Stac2 SH3 and cysteine rich domain 2
chr11 97898059 97898065 - miR-34 3 2 PEAK7881 3UTR EXN11 NM_146028 Stac2 SH3 and cysteine rich domain 2
chr1 97488011 97488018 - miR-181 5 3 PEAK348 3UTR EXN5 NM_009183 St8sia4 ST8 alpha-N-acetyl-neuraminide
chr1 97487992 97488000 - miR-30 5 3 PEAK348 3UTR EXN5 NM_009183 St8sia4 ST8 alpha-N-acetyl-neuraminide
chr1 97485727 97485733 - miR-21 4 3 PEAK347 3UTR EXN6 NM_009183 St8sia4 ST8 alpha-N-acetyl-neuraminide
chr1 97485706 97485712 - miR-27 4 3 PEAK347 3UTR EXN7 NM_009183 St8sia4 ST8 alpha-N-acetyl-neuraminide
chr9 35023885 35023891 + miR-125 6 4 PEAK5579 3UTR EXN14 NM_026130 Srpr signal recognition particle receptor ('docking
chr9 35023857 35023864 + miR-34 6 4 PEAK5579 3UTR EXN14 NM_026130 Srpr signal recognition particle receptor ('docking
chr6 112672249 112672256 - let-7 12 4 PEAK4135 3UTR EXN22 NM_080448 Srgap3 SLIT-ROBO Rho GTPase activating protein 3
chr10 59596635 59596641 + miR-221 13 5 PEAK6730 3UTR EXN11 NM_052994 Spock2 sparc/osteonectin cwcv and kazal-like domains
Page 8 of 157 Showing rows 701 - 800 (15663 total)
<   | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10   >   Next Block

Get the whole table