The Rockefeller University
Laboratory of Molecular Neuro-Oncology
RU Home  >  Research  >  Laboratory of Molecular Neuro-Oncology  >  Ago-miRNA-mRNA ternary map by HITS-CLIP



Brain Argonaute ternary map (mm9)
Enter a key word:
Select an miRNA:
Cluster Height: >=
BC: >=
Sort by:  
then by:  
then by:  
Page 7 of 157 Showing rows 601 - 700 (15663 total)
<   | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10   >   Next Block
chr4 141033968 141033975 - miR-15 2 2 PEAK2960 CDS EXN12 NM_019763 Spen SPEN homolog transcriptional regulator
chr4 141033987 141033994 - miR-9 2 2 PEAK2960 CDS EXN12 NM_019763 Spen SPEN homolog transcriptional regulator
chr4 141033981 141033988 - miR-34 2 2 PEAK2960 CDS EXN12 NM_019763 Spen SPEN homolog transcriptional regulator
chr4 141045849 141045855 - miR-9 4 2 PEAK2961 CDS EXN6 AK137647 Spen Adult female vagina cDNA RIKEN full-length enriched library clone:9930012G21 product:Msx2 interacting nuclear target protein full insert sequence. (Fragment).
chr4 141045817 141045823 - miR-26 4 2 PEAK2961 CDS EXN6 AK137647 Spen Adult female vagina cDNA RIKEN full-length enriched library clone:9930012G21 product:Msx2 interacting nuclear target protein full insert sequence. (Fragment).
chr3 54939907 54939913 + miR-124 3 2 PEAK1892
chr3 54939904 54939910 + miR-15 3 2 PEAK1892
chr12 77710088 77710095 - miR-138 3 2 PEAK8316 CDS EXN20 S66283 Spnb1 spectrin beta 1
chr7 28145062 28145068 - miR-9 2 2 PEAK4492 CDS EXN34 NM_032610 Spnb4 spectrin beta 4
chr7 28145023 28145029 - miR-34 2 2 PEAK4492 CDS EXN34 NM_032610 Spnb4 spectrin beta 4
chr7 28145011 28145017 - miR-19 2 2 PEAK4492 CDS EXN34 NM_032610 Spnb4 spectrin beta 4
chr7 28145048 28145054 - miR-125 2 2 PEAK4492 CDS EXN34 NM_032610 Spnb4 spectrin beta 4
chr3 37543100 37543106 + miR-101 3 2 PEAK1854 3UTR EXN3 NM_011896 Spry1 sprouty homolog 1
chr18 38749728 38749734 - miR-101 3 2 PEAK10929 CDS EXN2 NM_011898 Spry4 sprouty homolog 4
chr1 133184653 133184660 - miR-181 3 2 PEAK402 3UTR EXN27 NM_001081011 Srgap2 SLIT-ROBO Rho GTPase activating protein 2
chr1 133240951 133240957 - miR-138 2 2 PEAK405 CDS EXN10 NM_001081011 Srgap2 SLIT-ROBO Rho GTPase activating protein 2
chr1 133252187 133252194 - miR-21 3 2 PEAK406 CDS EXN7 NM_001081011 Srgap2 SLIT-ROBO Rho GTPase activating protein 2
chr5 23051346 23051352 - miR-181 4 2 PEAK3154 CDS EXN6 AK014004 Srpk2 Mus musculus mRNA for SRPK2 complete cds.
chr5 23051354 23051360 - miR-125 4 2 PEAK3154 CDS EXN6 AK014004 Srpk2 Mus musculus mRNA for SRPK2 complete cds.
chr11 74721282 74721288 - miR-221 2 2 PEAK7586 3UTR EXN9 NM_013761 Srr serine racemase
chr11 113485592 113485598 + miR-181 3 2 PEAK8007 CDS EXN1 NM_009217 Sstr2 somatostatin receptor 2 isoform B
chr11 113485628 113485634 + let-7 3 2 PEAK8007 CDS EXN1 NM_009217 Sstr2 somatostatin receptor 2 isoform B
chr15 66934531 66934538 - miR-125 2 2 PEAK9550 3UTR EXN9 NM_009177 St3gal1 ST3 beta-galactoside alpha-23-sialyltransferase
chr15 66934552 66934558 - miR-181 2 2 PEAK9550 3UTR EXN9 NM_009177 St3gal1 ST3 beta-galactoside alpha-23-sialyltransferase
chr7 116700896 116700902 - let-7 2 2 PEAK4752 CDS EXN3 AK158270 St5 suppression of tumorigenicity 5 isoform 1
chr7 116700947 116700953 - miR-193 2 2 PEAK4752 CDS EXN3 AK158270 St5 suppression of tumorigenicity 5 isoform 1
chr6 17872019 17872025 + miR-138 3 2 PEAK3814 CDS EXN13 NM_022332 St7 low density lipoprotein-related protein 12
chr11 97898059 97898065 - miR-34 3 2 PEAK7881 3UTR EXN11 NM_146028 Stac2 SH3 and cysteine rich domain 2
chr11 97898061 97898067 - miR-15 3 2 PEAK7881 3UTR EXN11 NM_146028 Stac2 SH3 and cysteine rich domain 2
chr11 97898072 97898079 - miR-34 3 2 PEAK7881 3UTR EXN11 NM_146028 Stac2 SH3 and cysteine rich domain 2
chr5 151841419 151841425 - miR-138 2 2 PEAK3779 3UTR EXN14 NM_146258 Stard13 serologically defined colon cancer antigen 13
chr5 151841441 151841447 - miR-19 2 2 PEAK3779 3UTR EXN14 NM_146258 Stard13 serologically defined colon cancer antigen 13
chr11 100749647 100749653 - miR-27 2 2 PEAK7904 3UTR EXN24 NM_011486 Stat3 signal transducer and activator of transcription
chr11 100750856 100750863 - miR-17 3 2 PEAK7906 CDS ITN23 NM_011486 Stat3 signal transducer and activator of transcription
chr1 16219643 16219649 - miR-344 2 2 PEAK22 3UTR EXN14 AF459099 Stau2 Double-stranded RNA-binding protein Staufen homolog 2.
chr1 16219648 16219654 - miR-26 2 2 PEAK22 3UTR EXN14 AF459099 Stau2 Double-stranded RNA-binding protein Staufen homolog 2.
chr14 121736687 121736693 - miR-193 3 2 PEAK9328 CDS EXN2 NM_145465 Stk24 serine/threonine protein kinase 24
chr14 121736702 121736708 - miR-344 3 2 PEAK9328 CDS EXN2 NM_145465 Stk24 serine/threonine protein kinase 24
chr4 125818092 125818098 + miR-15 3 2 PEAK2841 3UTR EXN11 NM_028800 Stk40 serine/threonine kinase 40
chr2 35170235 35170241 - let-7 3 2 PEAK1027 3UTR EXN7 NM_013515 Stom stomatin
chr11 120573157 120573164 - miR-9 3 2 PEAK8087 CDS EXN2 NM_016665 Stra13 stimulated by retinoic acid 13
chr11 120573179 120573186 - miR-19 3 2 PEAK8087 CDS EXN2 NM_016665 Stra13 stimulated by retinoic acid 13
chr11 120573171 120573178 - miR-125 3 2 PEAK8087 CDS EXN2 NM_016665 Stra13 stimulated by retinoic acid 13
chr11 120573177 120573183 - miR-17 3 2 PEAK8087 CDS EXN2 NM_016665 Stra13 stimulated by retinoic acid 13
chr19 11849904 11849910 - miR-181 2 2 PEAK11231 3UTR EXN11 NM_001025307 Stx3 syntaxin 3 isoform B
chr19 11849906 11849914 - miR-26 2 2 PEAK11231 3UTR EXN11 NM_001025307 Stx3 syntaxin 3 isoform B
chr19 11850003 11850009 - miR-17 3 2 PEAK11232 3UTR EXN11 NM_001025307 Stx3 syntaxin 3 isoform B
chr19 11850012 11850018 - miR-27 3 2 PEAK11232 3UTR EXN11 NM_001025307 Stx3 syntaxin 3 isoform B
chr14 45993520 45993526 + miR-9 2 2 PEAK9061 3UTR EXN11 NM_019637 Styx phosphoserine/threonine/tyrosine interaction
chr14 45993543 45993550 + miR-17 2 2 PEAK9061 3UTR EXN11 NM_019637 Styx phosphoserine/threonine/tyrosine interaction
chr14 45993553 45993561 + miR-26 2 2 PEAK9061 3UTR EXN11 NM_019637 Styx phosphoserine/threonine/tyrosine interaction
chr14 45996266 45996272 + miR-125 3 2 PEAK9064 3UTR EXN6 NM_019425 Gnpnat1 glucosamine-phosphate N-acetyltransferase 1
chr14 45996245 45996251 + miR-30 3 2 PEAK9064 3UTR EXN6 NM_019425 Gnpnat1 glucosamine-phosphate N-acetyltransferase 1
chr14 45996279 45996286 + let-7 3 2 PEAK9064 3UTR EXN6 NM_019425 Gnpnat1 glucosamine-phosphate N-acetyltransferase 1
chr14 79996602 79996608 + miR-101 4 2 PEAK9254 5UTR EXN3 AK010711 Sugt1 SGT1 suppressor of G2 allele of SKP1
chr6 108058337 108058343 - miR-9 5 2 PEAK4120 3UTR EXN9 NM_145937 Sumf1 sulfatase modifying factor 1 precursor
chr2 3375899 3375906 - let-7 3 2 PEAK808 CDS EXN6 NM_022724 Suv39h2 suppressor of variegation 3-9 homologue 2
chr7 82285899 82285905 - miR-138 4 2 PEAK4661 CDS EXN7 AK159028 Sv2b synaptic vesicle glycoprotein 2 b
chr18 5046611 5046619 + miR-9 3 2 PEAK10672 5UTR EXN1 NM_153153 Svil supervillin isoform 1
chrX 20441869 20441875 - miR-125 2 2 PEAK6250 CDS ITN10 AF085809 Syn1 Synapsin-1 (Synapsin I).
chr10 85814284 85814291 - miR-124 2 2 PEAK6933 CDS EXN7 AK087342 Syn3 synapsin III
chr9 88345115 88345121 - miR-17 2 2 PEAK5960 3UTR EXN12 NM_019796 Syncrip NS1-associated protein 1 isoform 2
chr9 88345068 88345074 - miR-124 2 2 PEAK5960 3UTR EXN12 NM_019796 Syncrip NS1-associated protein 1 isoform 2
chr9 88371993 88371999 - miR-26 2 2 PEAK5965 CDS EXN5 NM_019666 Syncrip NS1-associated protein 1 isoform 1
chr7 74876907 74876915 - miR-17 3 2 PEAK4635 3UTR EXN5 NM_207663 Dmn desmuslin isoform M
chr3 108016621 108016627 - miR-30 2 2 PEAK2174 3UTR EXN6 NM_008596 Sypl2 synaptophysin-like 2
chr3 108016617 108016623 - miR-9 2 2 PEAK2174 3UTR EXN6 NM_008596 Sypl2 synaptophysin-like 2
chr1 136641009 136641015 + miR-17 5 2 PEAK449 CDS EXN6 AF257304 Syt2 synaptotagmin II
chr8 26269312 26269318 - miR-138 2 2 PEAK5010 3UTR EXN13 NM_177089 Tacc1 transforming acidic coiled-coil containing
chr9 15113040 15113046 + miR-101 3 2 PEAK5509 3UTR EXN2 AK020036 Josd3 Josephin domain containing 3 isoform 3
chr9 15113008 15113015 + miR-708 3 2 PEAK5509 3UTR EXN2 AK020036 Josd3 Josephin domain containing 3 isoform 3
chr9 15113029 15113035 + miR-9 3 2 PEAK5509 3UTR EXN2 AK020036 Josd3 Josephin domain containing 3 isoform 3
chr9 15113041 15113049 + miR-27 3 2 PEAK5509 3UTR EXN2 AK020036 Josd3 Josephin domain containing 3 isoform 3
chrX 103402582 103402589 - miR-344 2 2 PEAK6425 3UTR EXN7 AK135097 Taf9b TAF9-like RNA polymerase II TATA box binding
chr16 45723137 45723143 - miR-9 4 2 PEAK10033 CDS EXN2 NM_019754 Tagln3 transgelin 3
chr11 77345752 77345758 - miR-138 2 2 PEAK7634 3UTR EXN20 NM_144825 Taok1 TAO kinase 1
chr11 77346489 77346495 - miR-344 2 2 PEAK7635 3UTR EXN20 NM_144825 Taok1 TAO kinase 1
chr11 77346511 77346518 - miR-17 2 2 PEAK7635 3UTR EXN20 NM_144825 Taok1 TAO kinase 1
chr11 77346564 77346571 - miR-153 3 2 PEAK7636 3UTR EXN20 NM_144825 Taok1 TAO kinase 1
chr11 77346575 77346581 - miR-124 3 2 PEAK7636 3UTR EXN20 NM_144825 Taok1 TAO kinase 1
chr11 77348130 77348136 - miR-15 2 2 PEAK7639 3UTR EXN20 NM_144825 Taok1 TAO kinase 1
chr11 77350845 77350851 - let-7 2 2 PEAK7646 3UTR EXN20 NM_144825 Taok1 TAO kinase 1
chr11 77350945 77350951 - miR-27 3 2 PEAK7647 3UTR EXN20 NM_144825 Taok1 TAO kinase 1
chr11 77350951 77350957 - miR-193 3 2 PEAK7647 3UTR EXN20 NM_144825 Taok1 TAO kinase 1
chr11 77367246 77367252 - miR-26 2 2 PEAK7651 CDS EXN14 NM_144825 Taok1 TAO kinase 1
chr11 77367253 77367259 - miR-9 2 2 PEAK7651 CDS EXN14 NM_144825 Taok1 TAO kinase 1
chr11 77369130 77369136 - miR-125 3 2 PEAK7652 CDS EXN13 NM_144825 Taok1 TAO kinase 1
chr17 34065282 34065289 + miR-221 3 2 PEAK10375 3UTR EXN8 NM_009318 Tapbp TAP binding protein isoform 2
chr10 60648108 60648114 + miR-15 3 2 PEAK6752 3UTR EXN6 AK006213 Spatial Mus musculus stromal protein associated with thymii and lymph nodes long isoform (Spatial) mRNA complete cds; alternatively spliced.
chr5 64651627 64651633 + miR-9 3 2 PEAK3271 CDS EXN3 AK148356 Tbc1d1 TBC1 domain family member 1
chr5 64651606 64651612 + miR-30 3 2 PEAK3271 CDS EXN3 AK148356 Tbc1d1 TBC1 domain family member 1
chr5 64651609 64651616 + let-7 3 2 PEAK3271 CDS EXN3 AK148356 Tbc1d1 TBC1 domain family member 1
chr5 64651637 64651643 + miR-19 3 2 PEAK3271 CDS EXN3 AK148356 Tbc1d1 TBC1 domain family member 1
chr17 50873691 50873697 - miR-138 3 2 PEAK10482 3UTR EXN22 NM_028162 Tbc1d5 TBC1 domain family member 5
chr1 4885064 4885071 + miR-181 4 2 PEAK7 CDS EXN9 NM_011541 Tcea1 transcription elongation factor A (SII) 1
chr2 181420568 181420574 + miR-27 2 2 PEAK1777 CDS EXN5 NM_009326 Tcea2 transcription elongation factor A protein 2
chr2 181420605 181420611 + miR-17 2 2 PEAK1777 CDS EXN5 NM_009326 Tcea2 transcription elongation factor A protein 2
chr17 23961772 23961778 - let-7 2 2 PEAK10283 3UTR EXN4 NM_026305 Tceb2 transcription elongation factor B (SIII)
chr4 135560672 135560679 - miR-221 3 2 PEAK2923 3UTR EXN11 NM_013736 Tceb3 transcription elongation factor B (SIII)
chr4 135560703 135560709 - miR-27 3 2 PEAK2923 3UTR EXN11 NM_013736 Tceb3 transcription elongation factor B (SIII)
Page 7 of 157 Showing rows 601 - 700 (15663 total)
<   | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10   >   Next Block

Get the whole table