The Rockefeller University
Laboratory of Molecular Neuro-Oncology
RU Home  >  Research  >  Laboratory of Molecular Neuro-Oncology  >  Ago-miRNA-mRNA ternary map by HITS-CLIP



Brain Argonaute ternary map (mm9)
Enter a key word:
Select an miRNA:
Cluster Height: >=
BC: >=
Sort by:  
then by:  
then by:  
Page 7 of 157 Showing rows 601 - 700 (15663 total)
<   | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10   >   Next Block
chrX 7771119 7771125 - miR-138 3 2 PEAK6187 3UTR EXN15 NM_023638 Porcn porcupine homolog isoform Mporc-d
chrX 7771144 7771150 - miR-153 3 2 PEAK6187 3UTR EXN15 NM_023638 Porcn porcupine homolog isoform Mporc-d
chr6 7816544 7816550 + miR-101 6 3 PEAK3792 CDS EXN3 NM_052993 C1galt1 core 1 synthase
chr6 7816545 7816551 + miR-27 6 3 PEAK3792 CDS EXN3 NM_052993 C1galt1 core 1 synthase
chr6 7816560 7816568 + miR-9 6 3 PEAK3792 CDS EXN3 NM_052993 C1galt1 core 1 synthase
chr6 7821175 7821182 + miR-124 12 3 PEAK3793 CDS EXN4 NM_052993 C1galt1 core 1 synthase
chr6 7821297 7821303 + miR-124 7 4 PEAK3794 3UTR EXN4 NM_052993 C1galt1 core 1 synthase
chr9 7932217 7932223 - miR-124 4 2 PEAK5502 3UTR EXN8 NM_009534 Yap1 yes-associated protein 1
chr9 7932240 7932247 - let-7 4 2 PEAK5502 3UTR EXN8 NM_009534 Yap1 yes-associated protein 1
chr9 7932997 7933005 - miR-21 3 4 PEAK5503 3UTR EXN8 NM_009534 Yap1 yes-associated protein 1
chr9 8022372 8022378 - miR-27 4 4 PEAK5504 3UTR EXN7 NM_199017 9230110C19Rik hypothetical protein LOC234912
chr9 8022388 8022394 - miR-101 4 4 PEAK5504 3UTR EXN7 NM_199017 9230110C19Rik hypothetical protein LOC234912
chr9 8022406 8022412 - miR-30 4 4 PEAK5504 3UTR EXN7 NM_199017 9230110C19Rik hypothetical protein LOC234912
chr5 8076219 8076225 - miR-181 17 5 PEAK3098 3UTR EXN30 NM_001098225 Adam22 a disintegrin and metalloprotease domain 22
chr5 8076326 8076333 - miR-124 17 5 PEAK3099 3UTR EXN30 NM_001098225 Adam22 a disintegrin and metalloprotease domain 22
chr5 8078647 8078654 - miR-30 19 5 PEAK3101 3UTR EXN30 NM_001098225 Adam22 a disintegrin and metalloprotease domain 22
chr5 8078670 8078678 - miR-30 19 5 PEAK3101 3UTR EXN30 NM_001098225 Adam22 a disintegrin and metalloprotease domain 22
chr4 8112751 8112757 - miR-27 3 2 PEAK2367 CDS EXN5 NM_007592 Car8 carbonic anhydrase-like
chr4 8112759 8112765 - miR-26 3 2 PEAK2367 CDS EXN5 NM_007592 Car8 carbonic anhydrase-like
chr5 8130483 8130489 - miR-125 4 2 PEAK3102 CDS EXN19-ITN20 NM_001007221 Adam22 a disintegrin and metalloprotease domain 22
chr15 8250833 8250839 - miR-124 3 2 PEAK9378 CDS EXN9 AK164261 Nipbl 9 days embryo whole body cDNA RIKEN full-length enriched library clone:D030046K22 product:IDN3-B protein homolog (Fragment).
chr15 8253408 8253414 - miR-153 4 3 PEAK9379 CDS EXN11 AK135347 Nipbl Mus musculus mRNA for delangin (Nipbl gene) variant A.
chr12 8275357 8275363 + miR-21 4 3 PEAK8124 CDS EXN5 BC057311 1110057K04Rik 1110057K04Rik protein.
chr12 8275361 8275367 + miR-26 4 3 PEAK8124 CDS EXN5 BC057311 1110057K04Rik 1110057K04Rik protein.
chr12 8275397 8275403 + miR-124 4 3 PEAK8124 CDS EXN5 BC057311 1110057K04Rik 1110057K04Rik protein.
chr15 8301429 8301435 - miR-9 4 3 PEAK9381 CDS EXN11 AK132654 Nipbl delangin isoform B
chr12 8349629 8349636 + miR-138 2 2 PEAK8125
chr12 8349820 8349826 + miR-193 2 2 PEAK8126
chr12 8349838 8349844 + miR-17 2 2 PEAK8126
chr12 8350288 8350295 + miR-124 3 3 PEAK8127
chr12 8350299 8350306 + miR-138 3 3 PEAK8127
chr12 8350308 8350315 + let-7 3 3 PEAK8127
chr12 8350328 8350334 + miR-19 3 3 PEAK8127
chr12 8350336 8350342 + miR-17 3 3 PEAK8127
chr17 8388143 8388149 + miR-124 6 3 PEAK10184 3UTR EXN12 NM_201230 Fgfr1op Fgfr1 oncogene partner
chr17 8388146 8388152 + miR-26 6 3 PEAK10184 3UTR EXN12 NM_201230 Fgfr1op Fgfr1 oncogene partner
chr17 8388161 8388167 + miR-9 6 3 PEAK10184 3UTR EXN12 NM_201230 Fgfr1op Fgfr1 oncogene partner
chr10 8445387 8445393 - miR-124 5 3 PEAK6582 CDS EXN20 NM_175155 Sash1 SAM and SH3 domain containing 1
chr10 8445407 8445414 - miR-124 5 3 PEAK6582 CDS EXN20 NM_175155 Sash1 SAM and SH3 domain containing 1
chr10 8449852 8449858 - miR-181 8 4 PEAK6583 CDS EXN18 NM_175155 Sash1 SAM and SH3 domain containing 1
chr10 8459174 8459181 - miR-125 4 4 PEAK6584 CDS EXN16 NM_175155 Sash1 SAM and SH3 domain containing 1
chr10 8461272 8461278 - miR-19 3 2 PEAK6585 CDS EXN14 NM_175155 Sash1 SAM and SH3 domain containing 1
chrX 8471318 8471324 + miR-101 7 3 PEAK6188 3UTR EXN1 NM_175327 B630019K06Rik hypothetical protein LOC102941
chrX 8471323 8471329 + miR-138 7 3 PEAK6188 3UTR EXN1 NM_175327 B630019K06Rik hypothetical protein LOC102941
chrX 8471669 8471675 + miR-181 6 3 PEAK6189 3UTR EXN1 NM_175327 B630019K06Rik hypothetical protein LOC102941
chrX 8471685 8471691 + miR-124 6 3 PEAK6189 3UTR EXN1 NM_175327 B630019K06Rik hypothetical protein LOC102941
chr5 8492421 8492427 - miR-9 3 2 PEAK3105 3UTR EXN10 NM_198620 Rundc3b RUN domain containing 3B
chr5 8492464 8492470 - miR-138 3 2 PEAK3105 CDS EXN10 NM_198620 Rundc3b RUN domain containing 3B
chr12 8504541 8504549 - miR-30 10 4 PEAK8128
chr12 8504775 8504781 - miR-221 5 2 PEAK8130 3UTR EXN1 NM_007483 Rhob ras homolog gene family member B
chr12 8504980 8504988 - miR-19 9 5 PEAK8131 3UTR EXN1 NM_007483 Rhob ras homolog gene family member B
chr12 8505101 8505107 - miR-17 5 3 PEAK8132 3UTR EXN1 NM_007483 Rhob ras homolog gene family member B
chr12 8505436 8505442 - miR-101 11 5 PEAK8133 3UTR EXN1 NM_007483 Rhob ras homolog gene family member B
chr3 8509568 8509574 + miR-708 11 3 PEAK1788 5UTR EXN1 NM_025285 Stmn2 stathmin-like 2
chr3 8509574 8509580 + miR-124 11 3 PEAK1788 5UTR EXN1 NM_025285 Stmn2 stathmin-like 2
chr3 8509597 8509603 + miR-19 11 3 PEAK1788 5UTR EXN1 NM_025285 Stmn2 stathmin-like 2
chr5 8520861 8520867 - miR-344 4 3 PEAK3106 CDS EXN8 NM_198620 Rundc3b RUN domain containing 3B
chr17 8535103 8535109 + miR-124 5 2 PEAK10185 3UTR EXN2 NM_178774 Prr18 proline rich region 18
chr6 8543721 8543728 + miR-19 10 4 PEAK3795 3UTR EXN6 AK028709 Gig18 Mus musculus GIG18 (Gig18) mRNA complete cds.
chr6 8544201 8544207 + miR-125 6 3 PEAK3796 3UTR EXN8 BC050802 Glcci1 glucocorticoid induced transcript 1 isoform 1
chr3 8545654 8545660 + miR-708 16 4 PEAK1789 CDS EXN3 NM_025285 Stmn2 stathmin-like 2
chr3 8545676 8545683 + miR-9 16 4 PEAK1789 CDS EXN3 NM_025285 Stmn2 stathmin-like 2
chr16 8578410 8578417 + miR-344 6 5 PEAK9855 CDS EXN3 NM_172961 Abat 4-aminobutyrate aminotransferase
chr8 8618041 8618047 - miR-124 4 4 PEAK4958 3UTR EXN5 NM_010111 Efnb2 ephrin B2
chr8 8618049 8618056 - miR-101 4 4 PEAK4958 3UTR EXN5 NM_010111 Efnb2 ephrin B2
chr8 8620898 8620904 - miR-125 11 4 PEAK4960 CDS EXN5 NM_010111 Efnb2 ephrin B2
chr8 8620908 8620914 - miR-124 11 4 PEAK4960 CDS EXN5 NM_010111 Efnb2 ephrin B2
chr16 8621500 8621506 + miR-153 14 3 PEAK9856 3UTR EXN16 NM_172961 Abat 4-aminobutyrate aminotransferase
chr16 8621518 8621526 + miR-30 14 3 PEAK9856 3UTR EXN16 NM_172961 Abat 4-aminobutyrate aminotransferase
chr3 8663847 8663853 - miR-27 4 3 PEAK1790 3UTR EXN5 NM_010423 Hey1 hairy/enhancer-of-split related with YRPW motif
chr3 8663848 8663854 - miR-101 4 3 PEAK1790 3UTR EXN5 NM_010423 Hey1 hairy/enhancer-of-split related with YRPW motif
chr3 8663853 8663860 - miR-138 4 3 PEAK1790 3UTR EXN5 NM_010423 Hey1 hairy/enhancer-of-split related with YRPW motif
chr3 8664041 8664047 - miR-17 3 2 PEAK1791 3UTR EXN5 NM_010423 Hey1 hairy/enhancer-of-split related with YRPW motif
chr3 8664064 8664070 - miR-181 3 2 PEAK1791 3UTR EXN5 NM_010423 Hey1 hairy/enhancer-of-split related with YRPW motif
chr3 8664072 8664078 - miR-153 3 2 PEAK1791 3UTR EXN5 NM_010423 Hey1 hairy/enhancer-of-split related with YRPW motif
chr4 8679706 8679713 + miR-125 4 3 PEAK2368 CDS EXN2 AK042727 Chd7 7 days neonate cerebellum cDNA RIKEN full-length enriched library clone:A730019I05 product:hypothetical protein full insert sequence. (Fragment).
chr4 8679719 8679726 + miR-138 4 3 PEAK2368 CDS EXN2 AK042727 Chd7 7 days neonate cerebellum cDNA RIKEN full-length enriched library clone:A730019I05 product:hypothetical protein full insert sequence. (Fragment).
chr4 8679771 8679778 + miR-153 4 2 PEAK2369 CDS EXN2 AK042727 Chd7 7 days neonate cerebellum cDNA RIKEN full-length enriched library clone:A730019I05 product:hypothetical protein full insert sequence. (Fragment).
chr4 8679789 8679797 + miR-125 4 2 PEAK2369 CDS EXN2 AK042727 Chd7 7 days neonate cerebellum cDNA RIKEN full-length enriched library clone:A730019I05 product:hypothetical protein full insert sequence. (Fragment).
chr16 8689726 8689732 - miR-181 4 4 PEAK9857 3UTR EXN31 NM_001003918 Usp7 ubiquitin specific peptidase 7
chr16 8689742 8689748 - miR-124 4 4 PEAK9857 3UTR EXN31 NM_001003918 Usp7 ubiquitin specific peptidase 7
chr16 8699236 8699242 - miR-21 5 3 PEAK9858 CDS EXN15 AK135814 Hausp Mus musculus herpesvirus-associated ubiquitin-specific protease (Hausp) mRNA complete cds.
chr16 8699246 8699253 - miR-125 5 3 PEAK9858 CDS EXN15 AK135814 Hausp Mus musculus herpesvirus-associated ubiquitin-specific protease (Hausp) mRNA complete cds.
chr16 8699275 8699281 - miR-19 5 3 PEAK9858 CDS EXN15 AK135814 Hausp Mus musculus herpesvirus-associated ubiquitin-specific protease (Hausp) mRNA complete cds.
chr16 8699278 8699284 - miR-34 5 3 PEAK9858 CDS EXN15 AK135814 Hausp Mus musculus herpesvirus-associated ubiquitin-specific protease (Hausp) mRNA complete cds.
chr4 8712851 8712857 + miR-9 7 3 PEAK2370 CDS EXN3 AK042727 Chd7 7 days neonate cerebellum cDNA RIKEN full-length enriched library clone:A730019I05 product:hypothetical protein full insert sequence. (Fragment).
chr12 8725854 8725861 + miR-15 5 3 PEAK8134 CDS EXN7 BC041773 Pum2 pumilio 2
chr12 8725858 8725864 + miR-708 5 3 PEAK8134 CDS EXN7 BC041773 Pum2 pumilio 2
chr12 8725865 8725871 + miR-125 5 3 PEAK8134 CDS EXN7 BC041773 Pum2 pumilio 2
chr19 8752961 8752967 + miR-193 4 3 PEAK11170 CDS EXN2 NM_007698 Chrm1 cholinergic receptor muscarinic 1 CNS
chr19 8752985 8752991 + miR-17 4 3 PEAK11170 CDS EXN2 NM_007698 Chrm1 cholinergic receptor muscarinic 1 CNS
chr4 8753655 8753663 + miR-125 15 3 PEAK2371 CDS EXN11 NM_001081417 Chd7 chromodomain helicase DNA binding protein 7
chr4 8753666 8753672 + miR-193 15 3 PEAK2371 CDS EXN11 NM_001081417 Chd7 chromodomain helicase DNA binding protein 7
chr12 8755658 8755666 + miR-124 6 4 PEAK8135 CDS EXN18 BC041773 Pum2 pumilio 2
chr19 8783812 8783818 - miR-708 2 2 PEAK11174 CDS EXN7 AK161280 Slc3a2 solute carrier family 3 (activators of dibasic
chr19 8783814 8783821 - miR-138 2 2 PEAK11174 CDS EXN7 AK161280 Slc3a2 solute carrier family 3 (activators of dibasic
chr19 8783833 8783840 - miR-138 2 2 PEAK11174 CDS EXN7 AK161280 Slc3a2 solute carrier family 3 (activators of dibasic
chr19 8783842 8783850 - miR-26 2 2 PEAK11174 CDS EXN7 AK161280 Slc3a2 solute carrier family 3 (activators of dibasic
chr4 8786440 8786446 + miR-193 15 5 PEAK2373 CDS EXN34 NM_001081417 Chd7 chromodomain helicase DNA binding protein 7
chr4 8786452 8786458 + miR-124 15 5 PEAK2373 CDS EXN34 NM_001081417 Chd7 chromodomain helicase DNA binding protein 7
Page 7 of 157 Showing rows 601 - 700 (15663 total)
<   | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10   >   Next Block

Get the whole table