The Rockefeller University
Laboratory of Molecular Neuro-Oncology
RU Home  >  Research  >  Laboratory of Molecular Neuro-Oncology  >  Ago-miRNA-mRNA ternary map by HITS-CLIP



Brain Argonaute ternary map (mm9)
Enter a key word:
Select an miRNA:
Cluster Height: >=
BC: >=
Sort by:  
then by:  
then by:  
Page 20 of 157 Showing rows 1901 - 2000 (15663 total)
Prev Block <   | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20   >   Next Block
chr11 43399752 43399759 + miR-15 18 5 PEAK7323 3UTR EXN6 NM_001045530 Ccnjl cyclin J-like
chr11 40567494 40567500 - miR-344 9 4 PEAK7287 CDS EXN2 NM_009831 Ccng1 cyclin G1
chr11 78092677 78092683 + miR-34 12 4 PEAK7661 CDS EXN25 NM_001002004 2610507B11Rik hypothetical protein LOC72503
chr11 78092679 78092686 + miR-124 12 4 PEAK7661 CDS EXN25 NM_001002004 2610507B11Rik hypothetical protein LOC72503
chr11 29404159 29404165 + miR-17 22 5 PEAK7199 3UTR EXN17 AK129310 Ccdc88a Mus musculus mRNA for hypothetical protein complete cds.
chr11 64816305 64816311 - miR-9 4 3 PEAK7478 3UTR EXN21 NM_175003 AU040829 Rho GTPase-activating protein RICH2 isoform 2
chr11 64854957 64854965 - miR-153 4 3 PEAK7479 CDS EXN8 NM_175003 AU040829 Rho GTPase-activating protein RICH2 isoform 2
chr11 64854971 64854978 - miR-9 4 3 PEAK7479 CDS EXN8 NM_175003 AU040829 Rho GTPase-activating protein RICH2 isoform 2
chr11 102150643 102150649 - miR-15 8 4 PEAK7924 3UTR EXN13 NM_001098836 Atxn7l3 ataxin 7-like 3 isoform a
chr11 60534985 60534991 - miR-34 3 3 PEAK7445 CDS EXN9 NM_022009 Flii flightless I homolog
chr11 97608189 97608195 - miR-15 2 2 PEAK7879 3UTR EXN10 NM_026186 Ccdc49 coiled-coil domain containing 49
chr11 97608208 97608214 - miR-9 2 2 PEAK7879 3UTR EXN10 NM_026186 Ccdc49 coiled-coil domain containing 49
chr11 106064875 106064881 - miR-193 6 3 PEAK7965 CDS EXN9 AK132273 Ccdc47 coiled-coil domain containing 47
chr11 106064853 106064860 - miR-153 6 3 PEAK7965 CDS EXN9 AK132273 Ccdc47 coiled-coil domain containing 47
chr11 106064861 106064868 - miR-9 6 3 PEAK7965 CDS EXN9 AK132273 Ccdc47 coiled-coil domain containing 47
chr11 83217990 83217996 + miR-101 8 4 PEAK7710 3UTR EXN22 NM_001035854 Ap2b1 adaptor-related protein complex 2 beta 1
chr11 83211287 83211295 + miR-30 10 3 PEAK7709 CDS EXN21 NM_001035854 Ap2b1 adaptor-related protein complex 2 beta 1
chr11 64816309 64816315 - miR-708 4 3 PEAK7478 3UTR EXN21 NM_175003 AU040829 Rho GTPase-activating protein RICH2 isoform 2
chr11 110936622 110936628 + miR-181 4 3 PEAK8005 3UTR EXN2 NM_008425 Kcnj2 potassium inwardly-rectifying channel J2
chr11 86048195 86048201 - miR-30 5 4 PEAK7722 CDS EXN13 NM_027421 Ints2 integrator complex subunit 2
chr11 86048209 86048215 - miR-125 5 4 PEAK7722 CDS EXN13 NM_027421 Ints2 integrator complex subunit 2
chr11 86038554 86038560 - miR-153 2 2 PEAK7721 CDS EXN18 NM_027421 Ints2 integrator complex subunit 2
chr11 86038525 86038532 - miR-138 2 2 PEAK7721 CDS EXN18 NM_027421 Ints2 integrator complex subunit 2
chr11 86038522 86038528 - miR-15 2 2 PEAK7721 CDS EXN18 NM_027421 Ints2 integrator complex subunit 2
chr11 86025076 86025082 - let-7 2 2 PEAK7720 3UTR EXN25 NM_027421 Ints2 integrator complex subunit 2
chr11 86025074 86025080 - miR-125 2 2 PEAK7720 3UTR EXN25 NM_027421 Ints2 integrator complex subunit 2
chr11 102151921 102151927 - miR-26 4 3 PEAK7926 3UTR EXN13 NM_001098836 Atxn7l3 ataxin 7-like 3 isoform a
chr11 102150687 102150693 - miR-221 8 4 PEAK7924 3UTR EXN13 NM_001098836 Atxn7l3 ataxin 7-like 3 isoform a
chr11 102150680 102150686 - miR-17 8 4 PEAK7924 3UTR EXN13 NM_001098836 Atxn7l3 ataxin 7-like 3 isoform a
chr11 29410558 29410564 + miR-9 6 3 PEAK7200 3UTR EXN19 AK129310 Ccdc88a Mus musculus mRNA for hypothetical protein complete cds.
chr11 17166607 17166614 + miR-15 4 3 PEAK7169 CDS EXN5 NM_020558 C1d nuclear DNA binding protein
chr11 29404164 29404170 + let-7 22 5 PEAK7199 3UTR EXN17 AK129310 Ccdc88a Mus musculus mRNA for hypothetical protein complete cds.
chr11 83211285 83211291 + miR-181 10 3 PEAK7709 CDS EXN21 NM_001035854 Ap2b1 adaptor-related protein complex 2 beta 1
chr11 86598453 86598459 - miR-15 2 2 PEAK7762 CDS EXN12 NM_026191 Dhx40 DEAH (Asp-Glu-Ala-His) box polypeptide 40
chr11 53075254 53075260 - miR-9 13 3 PEAK7381 CDS EXN19 NM_008300 Hspa4 heat shock protein 4
chr11 53075897 53075904 - miR-15 6 3 PEAK7382 CDS EXN18 NM_008300 Hspa4 heat shock protein 4
chr11 120649270 120649276 + miR-26 3 3 PEAK8090 CDS EXN10 NM_145370 Gps1 G protein pathway suppressor 1
chr11 120650331 120650338 + let-7 4 3 PEAK8091 3UTR EXN14 NM_145370 Gps1 G protein pathway suppressor 1
chr11 53078555 53078561 - miR-221 7 4 PEAK7383 CDS EXN16 AK053601 Hspa4 heat shock protein 4
chr11 42120116 42120122 - miR-15 2 2 PEAK7301 3UTR EXN9 NM_008068 Gabra6 gamma-aminobutyric acid (GABA-A) receptor
chr11 41968429 41968436 - miR-193 5 3 PEAK7299 CDS EXN5 NM_010250 Gabra1 gamma-aminobutyric acid (GABA-A) receptor
chr11 41966885 41966891 - miR-17 5 2 PEAK7298 CDS EXN6 NM_010250 Gabra1 gamma-aminobutyric acid (GABA-A) receptor
chr11 53078568 53078575 - miR-9 7 4 PEAK7383 CDS EXN16 AK053601 Hspa4 heat shock protein 4
chr11 53075268 53075274 - miR-9 13 3 PEAK7381 CDS EXN19 NM_008300 Hspa4 heat shock protein 4
chr11 53075298 53075304 - miR-19 13 3 PEAK7381 CDS EXN19 NM_008300 Hspa4 heat shock protein 4
chr11 86598458 86598464 - miR-125 2 2 PEAK7762 CDS EXN12 NM_026191 Dhx40 DEAH (Asp-Glu-Ala-His) box polypeptide 40
chr11 120647982 120647988 + miR-124 3 3 PEAK8088 CDS EXN5 NM_145370 Gps1 G protein pathway suppressor 1
chr11 120649050 120649058 + miR-124 3 3 PEAK8089 CDS EXN9 NM_145370 Gps1 G protein pathway suppressor 1
chr11 42120276 42120282 - miR-30 6 4 PEAK7303 3UTR EXN9 NM_008068 Gabra6 gamma-aminobutyric acid (GABA-A) receptor
chr11 42120199 42120206 - let-7 5 5 PEAK7302 3UTR EXN9 NM_008068 Gabra6 gamma-aminobutyric acid (GABA-A) receptor
chr11 42120142 42120148 - miR-153 2 2 PEAK7301 3UTR EXN9 NM_008068 Gabra6 gamma-aminobutyric acid (GABA-A) receptor
chr11 53073514 53073520 - miR-15 2 2 PEAK7379 3UTR EXN19 NM_008300 Hspa4 heat shock protein 4
chr11 53073539 53073545 - miR-21 2 2 PEAK7379 3UTR EXN19 NM_008300 Hspa4 heat shock protein 4
chr11 53075154 53075161 - miR-124 6 3 PEAK7380 CDS EXN19 NM_008300 Hspa4 heat shock protein 4
chr11 41949037 41949044 - miR-153 9 3 PEAK7296 CDS EXN9 NM_010250 Gabra1 gamma-aminobutyric acid (GABA-A) receptor
chr11 41946064 41946071 - miR-181 13 3 PEAK7294 3UTR EXN10 NM_010250 Gabra1 gamma-aminobutyric acid (GABA-A) receptor
chr11 11832779 11832785 - miR-34 4 2 PEAK7163 3UTR EXN17 NM_010345 Grb10 growth factor receptor bound protein 10
chr11 41945760 41945766 - miR-34 6 5 PEAK7293 3UTR EXN10 NM_010250 Gabra1 gamma-aminobutyric acid (GABA-A) receptor
chr11 41945757 41945763 - miR-15 6 5 PEAK7293 3UTR EXN10 NM_010250 Gabra1 gamma-aminobutyric acid (GABA-A) receptor
chr11 41945631 41945637 - miR-101 5 3 PEAK7291 3UTR EXN10 NM_010250 Gabra1 gamma-aminobutyric acid (GABA-A) receptor
chr11 41945184 41945191 - miR-15 15 4 PEAK7290 3UTR EXN10 NM_010250 Gabra1 gamma-aminobutyric acid (GABA-A) receptor
chr11 41945157 41945164 - miR-34 15 4 PEAK7290 3UTR EXN10 NM_010250 Gabra1 gamma-aminobutyric acid (GABA-A) receptor
chr11 41945202 41945208 - miR-181 15 4 PEAK7290 3UTR EXN10 NM_010250 Gabra1 gamma-aminobutyric acid (GABA-A) receptor
chr11 55314129 55314135 + miR-27 4 3 PEAK7422 3UTR EXN12 NM_013716 G3bp1 ras-GTPase-activating protein SH3-domain
chr11 55314109 55314116 + miR-15 4 3 PEAK7422 3UTR EXN12 NM_013716 G3bp1 ras-GTPase-activating protein SH3-domain
chr11 55314076 55314083 + miR-124 4 3 PEAK7422 3UTR EXN12 NM_013716 G3bp1 ras-GTPase-activating protein SH3-domain
chr11 53097120 53097127 - miR-124 6 2 PEAK7385 CDS EXN6 AK053601 Hspa4 heat shock protein 4
chr11 53080545 53080551 - miR-138 10 3 PEAK7384 CDS EXN14 AK053601 Hspa4 heat shock protein 4
chr11 51499496 51499502 - miR-138 2 2 PEAK7364 CDS EXN2 NM_025319 0610009B22Rik hypothetical protein LOC66050
chr11 51499452 51499458 - miR-193 2 2 PEAK7364 CDS EXN2 NM_025319 0610009B22Rik hypothetical protein LOC66050
chr11 11833076 11833082 - miR-17 7 4 PEAK7164 3UTR EXN17 NM_010345 Grb10 growth factor receptor bound protein 10
chr11 11833064 11833070 - miR-708 7 4 PEAK7164 3UTR EXN17 NM_010345 Grb10 growth factor receptor bound protein 10
chr11 53078575 53078581 - miR-344 7 4 PEAK7383 CDS EXN16 AK053601 Hspa4 heat shock protein 4
chr11 53080516 53080522 - miR-138 10 3 PEAK7384 CDS EXN14 AK053601 Hspa4 heat shock protein 4
chr11 53080513 53080519 - miR-15 10 3 PEAK7384 CDS EXN14 AK053601 Hspa4 heat shock protein 4
chr11 53080539 53080545 - miR-27 10 3 PEAK7384 CDS EXN14 AK053601 Hspa4 heat shock protein 4
chr11 53080565 53080571 - miR-9 10 3 PEAK7384 CDS EXN14 AK053601 Hspa4 heat shock protein 4
chr11 55313927 55313934 + miR-124 5 3 PEAK7421 3UTR EXN12 NM_013716 G3bp1 ras-GTPase-activating protein SH3-domain
chr11 4916695 4916701 + miR-27 6 4 PEAK7142 CDS EXN5 NM_007454 Ap1b1 adaptor protein complex AP-1 beta 1 subunit
chr11 42444850 42444856 + miR-9 5 4 PEAK7317 3UTR EXN10 NM_008070 Gabrb2 gamma-aminobutyric acid (GABA-A) receptor
chr11 42444901 42444907 + miR-34 5 4 PEAK7317 3UTR EXN10 NM_008070 Gabrb2 gamma-aminobutyric acid (GABA-A) receptor
chr11 42444061 42444068 + let-7 5 4 PEAK7316 3UTR EXN10 NM_008070 Gabrb2 gamma-aminobutyric acid (GABA-A) receptor
chr11 42444055 42444063 + miR-101 5 4 PEAK7316 3UTR EXN10 NM_008070 Gabrb2 gamma-aminobutyric acid (GABA-A) receptor
chr11 42442612 42442618 + miR-181 5 3 PEAK7314 3UTR EXN10 NM_008070 Gabrb2 gamma-aminobutyric acid (GABA-A) receptor
chr11 42442581 42442587 + miR-124 5 3 PEAK7314 3UTR EXN10 NM_008070 Gabrb2 gamma-aminobutyric acid (GABA-A) receptor
chr11 42407431 42407437 + miR-15 5 3 PEAK7312 CDS EXN8 NM_008070 Gabrb2 gamma-aminobutyric acid (GABA-A) receptor
chr11 69845250 69845256 + let-7 8 5 PEAK7543 CDS EXN8 NM_007864 Dlg4 postsynaptic density protein 95
chr11 42407404 42407410 + miR-708 5 3 PEAK7312 CDS EXN8 NM_008070 Gabrb2 gamma-aminobutyric acid (GABA-A) receptor
chr11 42444856 42444862 + miR-19 5 4 PEAK7317 3UTR EXN10 NM_008070 Gabrb2 gamma-aminobutyric acid (GABA-A) receptor
chr11 42445047 42445055 + miR-9 7 4 PEAK7318 3UTR EXN10 NM_008070 Gabrb2 gamma-aminobutyric acid (GABA-A) receptor
chr11 69832405 69832411 + miR-193 9 5 PEAK7542 5UTR EXN1 NM_007864 Dlg4 postsynaptic density protein 95
chr11 94290394 94290401 - miR-124 5 3 PEAK7833 CDS EXN22 NM_009783 Cacna1g calcium channel voltage-dependent T type
chr11 94323738 94323744 - miR-124 2 2 PEAK7834 CDS EXN6 NM_009783 Cacna1g calcium channel voltage-dependent T type
chr11 94327497 94327503 - miR-27 2 2 PEAK7835 CDS EXN2 NM_009783 Cacna1g calcium channel voltage-dependent T type
chr11 97871656 97871663 - miR-124 3 2 PEAK7880 CDS EXN8 NM_031173 Cacnb1 calcium channel voltage-dependent beta 1
chr11 41725841 41725848 - miR-30 4 3 PEAK7288 CDS EXN10 NM_008073 Gabrg2 gamma-aminobutyric acid (GABA-A) receptor
chr11 42445783 42445789 + miR-221 14 5 PEAK7320 3UTR EXN10 NM_008070 Gabrb2 gamma-aminobutyric acid (GABA-A) receptor
chr11 42445140 42445147 + miR-9 6 4 PEAK7319 3UTR EXN10 NM_008070 Gabrb2 gamma-aminobutyric acid (GABA-A) receptor
chr11 42445129 42445135 + miR-34 6 4 PEAK7319 3UTR EXN10 NM_008070 Gabrb2 gamma-aminobutyric acid (GABA-A) receptor
chr11 69845265 69845271 + miR-153 8 5 PEAK7543 CDS EXN8 NM_007864 Dlg4 postsynaptic density protein 95
Page 20 of 157 Showing rows 1901 - 2000 (15663 total)
Prev Block <   | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20   >   Next Block

Get the whole table