The Rockefeller University
Laboratory of Molecular Neuro-Oncology
RU Home  >  Research  >  Laboratory of Molecular Neuro-Oncology  >  Ago-miRNA-mRNA ternary map by HITS-CLIP



Brain Argonaute ternary map (mm8)
Enter a key word:
Select an miRNA:
Cluster Height: >=
BC: >=
Sort by:  
then by:  
then by:  
Page 10 of 157 Showing rows 901 - 1000 (15664 total)
<   | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10   >   Next Block
chr6 112732695 112732701 - let-7 7 3 PEAK4137
chr14 56556728 56556734 - let-7 2 2 PEAK9142
chr7 109348559 109348565 - let-7 2 2 PEAK4752 CDS EXN3 AK158270 St5 Adult inner ear cDNA RIKEN full-length enriched library clone:F930049H14 product:Suppression of tumorigenicity 5 homolog.
chr17 33548132 33548138 + let-7 7 3 PEAK10377 3UTR EXN18 NM_009059 Rgl2 RAB2 member RAS oncogene family-like
chr11 113440404 113440410 + let-7 3 2 PEAK8007 CDS EXN2 NM_009217 Sstr2 somatostatin receptor 2
chr13 46698009 46698015 - let-7 7 4 PEAK8623 CDS EXN18 NM_175749 Nup153 nucleoporin 153
chr1 171580043 171580049 - let-7 10 4 PEAK625 3UTR EXN5 NM_009062 Rgs4 regulator of G-protein signaling 4
chr4 131999439 131999447 - let-7 3 3 PEAK2890 3UTR EXN3 NM_201368 Xkr8 X Kell blood group precursor related family
chr13 106071260 106071266 - let-7 10 3 PEAK8875 3UTR EXN6 AK036240 D13Bwg1146e Adult male cortex cDNA RIKEN full-length enriched library clone:B530005C16 product:hypothetical protein full insert sequence (Palmitoylated membrane anchor R7BP).
chr5 114204113 114204119 - let-7 4 3 PEAK3479 CDS EXN15 NM_198109 Ssh1 slingshot homolog 1
chr8 73526564 73526570 - let-7 4 3 PEAK5209 3UTR EXN17 NM_133772 Ssbp4 single stranded DNA binding protein 4
chr17 23548764 23548770 + let-7 8 5 PEAK10282 CDS EXN1 BC027781 Srrm2 Srrm2 protein.
chr11 23189899 23189906 + let-7 5 4 PEAK7195 CDS EXN8 BC012276 Xpo1 6 days neonate skin cDNA RIKEN full-length enriched library clone:A030008K03 product:CRM1 PROTEIN homolog (Fragment).
chr17 45714762 45714769 + let-7 6 3 PEAK10462 CDS EXN7 BC100575 Yipf3 Yipf3 protein.
chr13 105319070 105319077 + let-7 12 3 PEAK8873 CDS EXN8 NM_030731 Trim23 tripartite motif protein 23
chr3 124314329 124314335 + let-7 7 3 PEAK2226 3UTR EXN1 NM_146140 Tram1l1 translocation associated membrane protein 1-like
chr6 5239024 5239030 - let-7 5 3 PEAK3789 CDS EXN2 AK007350 Pon2 Serum paraoxonase/arylesterase 2 (EC 3.1.1.2) (EC 3.1.8.1) (PON 2) (Serum aryldialkylphosphatase 2) (A-esterase 2) (Aromatic esterase 2).
chr1 58890828 58890834 - let-7 2 2 PEAK143 CDS EXN1 NM_172406 Trak2 trafficking protein kinesin binding 2
chr13 6587813 6587819 - let-7 9 3 PEAK8516 CDS EXN17 AK076803 Pfkp Adult male testis cDNA RIKEN full-length enriched library clone:4930471L09 product:phosphofructokinase platelet full insert sequence.
chr1 132535645 132535653 - let-7 16 4 PEAK397 CDS EXN3 X98847 Pfkfb2 6-phosphofructo-2-kinase/fructose-26-biphosphatase 2 (6PF-2-K/Fru- 26-P2ASE heart-type isozyme) (PFK-2/FBPase-2) [Includes: 6- phosphofructo-2-kinase (EC 2.7.1.105); Fructose-26-bisphosphatase (EC 3.1.3.46)].
chr18 61424013 61424020 - let-7 8 3 PEAK10992 3UTR EXN13 AK028464 Ppargc1b 0 day neonate skin cDNA RIKEN full-length enriched library clone:4631412G21 product:PPAR GAMMA COACTIVATOR-1BETA PROTEIN full insert sequence.
chr18 61424021 61424028 - let-7 8 3 PEAK10992 3UTR EXN13 AK028464 Ppargc1b 0 day neonate skin cDNA RIKEN full-length enriched library clone:4631412G21 product:PPAR GAMMA COACTIVATOR-1BETA PROTEIN full insert sequence.
chr4 149873012 149873020 - let-7 5 3 PEAK3040 CDS EXN8 AK036345 Per3 MPer3 protein (Fragment).
chr1 43916198 43916205 + let-7 26 5 PEAK101 CDS EXN13 BC058239 Tpp2 Tpp2 protein.
chr2 119504686 119504694 + let-7 11 4 PEAK1381 CDS EXN18 U18342 Tyro3 Tyrosine-protein kinase receptor TYRO3 precursor (EC 2.7.1.112) (Tyrosine-protein kinase RSE) (Tyrosine-protein kinase DTK) (TK19-2) (Etk2/tyro3).
chr1 172003561 172003567 - let-7 7 3 PEAK630 CDS EXN2 NM_133806 Uap1 UDP-N-acetylglucosamine pyrophosphorylase 1
chr4 108359464 108359470 + let-7 8 4 PEAK2719 3UTR EXN7 NM_025334 Txndc12 endoplasmic reticulum protein ERp19
chr5 64407043 64407049 + let-7 5 4 PEAK3270 3UTR EXN14 NM_025700 Pgm1 phosphoglucomutase 1
chrX 89733279 89733286 - let-7 2 2 PEAK6374 CDS EXN31 NM_008892 Pola1 polymerase (DNA directed) alpha 1
chr8 24105471 24105477 - let-7 4 3 PEAK5000 CDS ITN11 NM_011130 Polb polymerase (DNA directed) beta
chr13 43088679 43088686 + let-7 28 4 PEAK8595 CDS EXN6 BC061691 Phactr1 16 days embryo head cDNA RIKEN full-length enriched library clone:C130040I10 product:hypothetical RPEL repeat containing protein full insert sequence (Phactr1 protein).
chr9 107423502 107423509 + let-7 9 4 PEAK6038 3UTR EXN3 NM_019742 Tusc2 tumor suppressor candidate 2
chr13 82152950 82152956 - let-7 2 3 PEAK8737 3UTR EXN8 BC066818 BC066818 DNA-directed RNA polymerase III 32 kDa polypeptide (EC 2.7.7.6) (RNA polymerase III C32 subunit).
chr3 84250594 84250600 - let-7 5 4 PEAK1989 3UTR EXN12 AK141419 Trim2 Tripartite motif protein 2 (Neural activity-related RING finger protein).
chr12 15818802 15818808 - let-7 8 5 PEAK8149 3UTR EXN3 NM_144551 Trib2 tribbles homolog 2
chr15 59485840 59485847 + let-7 6 3 PEAK9533 3UTR EXN3 NM_144549 Trib1 tribbles homolog 1
chrX 33033667 33033673 + let-7 28 5 PEAK6258 CDS EXN2 NM_016783 Pgrmc1 progesterone receptor membrane component
chr15 77742454 77742461 - let-7 5 3 PEAK9618 3UTR EXN4 NM_019913 Txn2 thioredoxin 2
chr10 113803356 113803363 - let-7 3 2 PEAK7022 3UTR EXN19 NM_146241 Trhde thyrotropin-releasing hormone degrading
chr11 87048042 87048050 - let-7 6 3 PEAK7772 CDS EXN7 NM_177167 Ppm1e protein phosphatase 1E (PP2C domain containing)
chrX 19839591 19839597 + let-7 8 4 PEAK6243 3UTR EXN26 NM_009457 Ube1x ubiquitin-activating enzyme E1 Chr X
chr7 122984125 122984131 + let-7 6 4 PEAK4821 CDS ITN13 BC005741 BC005741 Tnrc6a protein.
chr4 138570692 138570704 - let-7 6 3 PEAK2946 3UTR EXN8 NM_145384 Pqlc2 PQ loop repeat containing 2
chr11 51829196 51829202 - let-7 3 2 PEAK7369 3UTR EXN6 NM_009458 Ube2b ubiquitin-conjugating enzyme E2B RAD6 homology
chr1 163078418 163078424 - let-7 21 5 PEAK565 CDS EXN5 NM_007453 Prdx6 peroxiredoxin 6
chr11 51829173 51829179 - let-7 3 2 PEAK7369 3UTR EXN6 NM_009458 Ube2b ubiquitin-conjugating enzyme E2B RAD6 homology
chr1 93116221 93116227 + let-7 2 2 PEAK291 3UTR EXN11 NM_026454 Ube2f NEDD8-conjugating enzyme
chr2 132221476 132221482 - let-7 5 4 PEAK1513 3UTR EXN18 BC033408 2310032D16Rik 12 days embryo spinal ganglion cDNA RIKEN full-length enriched library clone:D130067O11 product:hypothetical Glycerophosphoryl diester phosphodiesterase containing protein full insert sequence.
chr6 29508831 29508837 - let-7 4 2 PEAK3845 CDS EXN17 NM_177296 Tnpo3 transportin 3
chr4 41362751 41362757 + let-7 7 3 PEAK2440 CDS EXN2 NM_026275 Ube2r2 ubiquitin-conjugating enzyme E2R 2
chr17 84985130 84985136 - let-7 6 5 PEAK10603 CDS EXN7 AK028877 Prepl 10 days neonate skin cDNA RIKEN full-length enriched library clone:4732465M09 product:hypothetical Prolyl oligopeptidase/Prolyl oligopeptidase N-terminal beta-propeller domain/Esterase/lipase/thioesterase family active site containing protein full ins
chr5 151069290 151069296 + let-7 5 3 PEAK3776 CDS EXN31 NM_175310 Aprin androgen-induced prostate proliferative shutoff
chr15 80626007 80626013 + let-7 15 4 PEAK9664 5UTR EXN1 NM_177124 Tnrc6b trinucleotide repeat containing 6b isoform 2
chr7 126578610 126578618 - let-7 4 2 PEAK4838 CDS EXN6 NM_019674 Ppp4c protein phosphatase 4 catalytic subunit
chr3 69637290 69637296 + let-7 7 3 PEAK1929 CDS EXN3 AY184801 Ppm1l Protein phosphatase 2C isoform epsilon (EC 3.1.3.16) (PP2C-epsilon) (Protein phosphatase 1L) (Protein phosphatase 1-like).
chr12 112282679 112282685 - let-7 5 4 PEAK8491 CDS EXN11 NM_011625 Ppp1r13b protein phosphatase 1 regulatory (inhibitor)
chr14 121155199 121155205 + let-7 6 3 PEAK9337 5UTR EXN3 BC017635 BC017635 Phgdhl1 protein.
chr4 41394355 41394361 - let-7 5 3 PEAK2444 CDS EXN16 NM_026872 Ubap2 ubiquitin-associated protein 2
chr17 47150130 47150136 - let-7 13 4 PEAK10476 3UTR EXN2 NM_025365 1110002E23Rik hypothetical protein LOC66119
chr3 136806064 136806071 + let-7 13 4 PEAK2289 CDS EXN3 BC096652 Ppp3ca Hypothetical protein.
chr3 136813554 136813560 + let-7 9 4 PEAK2290 CDS ITN4 BC096652 Ppp3ca Hypothetical protein.
chr15 72636411 72636417 - let-7 7 3 PEAK9565 5UTR ITN17 BC070463 1810044A24Rik 10 day old male pancreas cDNA RIKEN full-length enriched library clone:1810044A24 product:hypothetical protein full insert sequence.
chr3 90094274 90094281 - let-7 7 4 PEAK2021 CDS EXN25 AK079895 Ubap2l 2 days neonate thymus thymic cells cDNA RIKEN full-length enriched library clone:E430024B05 product:NICE-4 PROTEIN homolog.
chr15 72635566 72635572 - let-7 2 2 PEAK9562 5UTR ITN17 BC070463 1810044A24Rik 10 day old male pancreas cDNA RIKEN full-length enriched library clone:1810044A24 product:hypothetical protein full insert sequence.
chr11 17099882 17099888 + let-7 13 4 PEAK7168 3UTR EXN6 AK160938 Ppp3r1 Adult male testis cDNA RIKEN full-length enriched library clone:4933413M05 product:protein phospatase 3 regulatory subunit B alpha isoform (calcineurin B type I) full insert sequence.
chr5 65917011 65917018 - let-7 10 3 PEAK3278 CDS EXN6 BC021408 BC021408 9030416H16Rik protein.
chr3 34003849 34003856 + let-7 4 3 PEAK1844
chr7 3725628 3725636 + let-7 53 5 PEAK4379 CDS EXN2 NM_021324 Ttyh1 tweety 1 isoform 2
chr13 102802102 102802109 - let-7 16 3 PEAK8859 CDS EXN6 BC026146 Pik3r1 Phosphatidylinositol 3-kinase regulatory alpha subunit (PI3-kinase p85-alpha subunit) (PtdIns-3-kinase p85-alpha) (PI3K).
chr7 27240919 27240926 - let-7 24 4 PEAK4494 3UTR EXN14 NM_011116 Pld3 phospholipase D family member 3
chr11 3242888 3242895 + let-7 11 3 PEAK7131 3UTR EXN6 NM_178149 1500004A08Rik Hgfl protein
chr7 3737973 3737979 + let-7 24 5 PEAK4386 5UTR ITN2 AK050966 Ttyh1 9 days embryo whole body cDNA RIKEN full-length enriched library clone:D030047H15 product:hypothetical protein full insert sequence.
chr7 116130870 116130876 - let-7 6 4 PEAK4785 3UTR EXN32 NM_011083 Pik3c2a phosphatidylinositol 3-kinase C2 domain
chr15 75999151 75999157 - let-7 10 3 PEAK9590 3UTR EXN32 NM_011117 Plec1 plectin 1 isoform 1
chr11 78158453 78158460 + let-7 14 4 PEAK7666 3UTR EXN12 NM_201406 Pigs phosphatidylinositol glycan class S homolog
chr1 174217776 174217783 + let-7 6 3 PEAK681
chr13 111521141 111521147 + let-7 6 3 PEAK8885 3UTR EXN14 NM_152804 Plk2 polo-like kinase 2
chrX 159776101 159776108 + let-7 3 3 PEAK6519 3UTR EXN6 NM_011081 Piga phosphatidylinositol glycan class A
chr2 93004545 93004551 - let-7 4 3 PEAK1295 3UTR EXN10 NM_183180 Tspan18 tetraspanin 18
chr1 74620944 74620952 + let-7 7 3 PEAK221 CDS EXN11 NM_001014974 Ttll4 tubulin tyrosine ligase-like family member 4
chr9 59477017 59477023 + let-7 2 2 PEAK5745 3UTR EXN11 NM_011099 Pkm2 pyruvate kinase 3
chr3 142731295 142731302 - let-7 5 4 PEAK2308 CDS EXN22 NM_178654 Pkn2 serine/threonine kinase 7
chr2 59112616 59112622 + let-7 12 4 PEAK1106 CDS EXN9 BC082578 Pkp4 Plakophilin-4 (Armadillo-related protein).
chrX 9753398 9753404 + let-7 8 3 PEAK6204 3UTR EXN8 BC058603 Tspan7 Tspan7 protein.
chr15 43357696 43357702 + let-7 14 4 PEAK9479 3UTR EXN11 NM_025736 4921531G14Rik hypothetical protein LOC66736
chr2 152923376 152923384 - let-7 4 3 PEAK1610 CDS ITN4 BC037664 Plagl2 Plagl2 protein.
chr2 18761962 18761968 - let-7 2 2 PEAK862 3UTR EXN10 NM_008845 Pip5k2a phosphatidylinositol-4-phosphate 5-kinase type
chr5 120746724 120746730 - let-7 14 4 PEAK3511 CDS EXN11 NM_023625 1300012G16Rik hypothetical protein LOC71772
chr2 134986425 134986433 + let-7 25 4 PEAK1522 CDS EXN10 NM_019677 Plcb1 phospholipase C beta 1
chr19 38794081 38794089 + let-7 6 4 PEAK11321 CDS EXN5 AK035546 Plce1 Adult male urinary bladder cDNA RIKEN full-length enriched library clone:9530064F18 product:PANCREAS-ENRICHED PHOSPHOLIPASE C homolog.
chr4 153844326 153844333 - let-7 4 3 PEAK3053 CDS EXN7 DQ176851 Plcl4 Phospholipase C-eta2.
chr9 92397566 92397573 + let-7 5 3 PEAK5972 CDS EXN9 NM_011961 Plod2 procollagen lysine 2-oxoglutarate 5-dioxygenase
chr7 90051885 90051891 + let-7 15 4 PEAK4701 CDS EXN11 BC011470 Picalm Phosphatidylinositol-binding clathrin assembly protein (Clathrin assembly lymphoid myeloid leukemia) (CALM).
chr8 126307089 126307095 + let-7 8 3 PEAK5460 CDS EXN4 NM_023279 Tubb3 tubulin beta 3
chr17 56765542 56765548 - let-7 34 5 PEAK10506 3UTR EXN4 NM_009451 Tubb4 tubulin beta 4
chr17 56765534 56765540 - let-7 34 5 PEAK10506 3UTR EXN4 NM_009451 Tubb4 tubulin beta 4
chr9 82672929 82672936 - let-7 5 3 PEAK5945 CDS EXN15 AF310251 AF310251 IRS-1 PH domain binding protein PHIP.
chr5 144179289 144179296 + let-7 5 3 PEAK3718 CDS EXN11 NM_008886 Pms2 postmeiotic segregation increased 2
chr17 56766345 56766351 - let-7 4 4 PEAK10509 CDS EXN4 NM_009451 Tubb4 tubulin beta 4
chr1 84621318 84621325 - let-7 4 3 PEAK270 CDS EXN14 BC034113 Trip12 12 days embryo embryonic body between diaphragm region and neck cDNA RIKEN full-length enriched library clone:9430042F05 product:hypothetical protein full insert sequence. (Fragment).
Page 10 of 157 Showing rows 901 - 1000 (15664 total)
<   | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10   >   Next Block

Get the whole table