The Rockefeller University
Laboratory of Molecular Neuro-Oncology
RU Home  >  Research  >  Laboratory of Molecular Neuro-Oncology  >  Ago-miRNA-mRNA ternary map by HITS-CLIP



Brain Argonaute ternary map (mm8)
Enter a key word:
Select an miRNA:
Cluster Height: >=
BC: >=
Sort by:  
then by:  
then by:  
Page 10 of 157 Showing rows 901 - 1000 (15664 total)
<   | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10   >   Next Block
chr1 51130119 51130125 + miR-124 27 5 PEAK116 3UTR EXN10 NM_019790 Tmeff2 transmembrane protein with EGF-like and two
chr1 50872631 50872638 + miR-34 9 3 PEAK115 CDS EXN1 NM_019790 Tmeff2 transmembrane protein with EGF-like and two
chr1 56738761 56738767 - miR-124 4 3 PEAK135 3UTR EXN10 AK129270 Satb2 DNA-binding protein SATB2 (Special AT-rich sequence-binding protein 2).
chr1 56835772 56835778 - miR-153 6 3 PEAK136 CDS EXN6 NM_139146 Satb2 two cut domains-containing homeodomain protein
chr1 56842550 56842557 - miR-124 7 3 PEAK137 CDS EXN5 NM_139146 Satb2 two cut domains-containing homeodomain protein
chr1 56842533 56842539 - miR-9 7 3 PEAK137 CDS EXN5 NM_139146 Satb2 two cut domains-containing homeodomain protein
chr1 94750303 94750310 + miR-124 6 4 PEAK300 3UTR EXN11 NM_181405 Rnpepl1 arginyl aminopeptidase (aminopeptidase B)-like
chr1 94750391 94750397 + miR-193 24 4 PEAK301 3UTR EXN11 NM_181405 Rnpepl1 arginyl aminopeptidase (aminopeptidase B)-like
chr1 94750414 94750420 + miR-101 24 4 PEAK301 3UTR EXN11 NM_181405 Rnpepl1 arginyl aminopeptidase (aminopeptidase B)-like
chr1 79314705 79314711 - miR-181 2 2 PEAK251 CDS EXN3 BC048249 Scg2 Secretogranin-2 precursor (Secretogranin II) (SgII) (Chromogranin C) [Contains: Secretoneurin (SN)].
chr1 79315612 79315618 - miR-124 6 2 PEAK253 CDS EXN2 BC048249 Scg2 Secretogranin-2 precursor (Secretogranin II) (SgII) (Chromogranin C) [Contains: Secretoneurin (SN)].
chr1 94746317 94746324 + let-7 3 3 PEAK297 CDS EXN3 NM_181405 Rnpepl1 arginyl aminopeptidase (aminopeptidase B)-like
chr1 99765083 99765089 - miR-153 2 2 PEAK357 CDS EXN5 NM_013626 Pam peptidylglycine alpha-amidating monooxygenase
chr1 121355453 121355459 + miR-30 4 3 PEAK367 3UTR EXN1 AK010846 2500001K11Rik 13 days embryo liver cDNA RIKEN full-length enriched library clone:2500001K11 product:hypothetical protein full insert sequence.
chr1 121355442 121355448 + miR-9 4 3 PEAK367 3UTR EXN1 AK010846 2500001K11Rik 13 days embryo liver cDNA RIKEN full-length enriched library clone:2500001K11 product:hypothetical protein full insert sequence.
chr1 107107492 107107498 - miR-30 7 3 PEAK359
chr1 136560843 136560849 + miR-17 5 2 PEAK449 CDS EXN7 NM_009307 Syt2 synaptotagmin 2
chr1 194681202 194681208 - miR-124 3 3 PEAK795 CDS EXN4 NM_181546 Syt14 synaptotagmin XIV
chr1 107107497 107107504 - miR-17 7 3 PEAK359
chr1 107107507 107107515 - miR-19 7 3 PEAK359
chr1 153232139 153232145 - miR-9 6 4 PEAK492 3UTR EXN7 NM_011277 Rnf2 ring finger protein 2
chr1 99652091 99652097 - miR-101 4 3 PEAK355 3UTR EXN26 NM_013626 Pam peptidylglycine alpha-amidating monooxygenase
chr1 99670750 99670758 - miR-9 2 2 PEAK356 CDS EXN20 NM_013626 Pam peptidylglycine alpha-amidating monooxygenase
chr1 99765122 99765128 - miR-193 2 2 PEAK357 CDS EXN5 NM_013626 Pam peptidylglycine alpha-amidating monooxygenase
chr1 99765095 99765102 - miR-15 2 2 PEAK357 CDS EXN5 NM_013626 Pam peptidylglycine alpha-amidating monooxygenase
chr1 153233265 153233271 - miR-17 3 3 PEAK493 3UTR EXN7 NM_011277 Rnf2 ring finger protein 2
chr1 79315609 79315615 - miR-26 6 2 PEAK253 CDS EXN2 BC048249 Scg2 Secretogranin-2 precursor (Secretogranin II) (SgII) (Chromogranin C) [Contains: Secretoneurin (SN)].
chr1 94750608 94750616 + miR-124 24 4 PEAK303 3UTR EXN11 NM_181405 Rnpepl1 arginyl aminopeptidase (aminopeptidase B)-like
chr1 167706158 167706166 - miR-9 10 3 PEAK605 3UTR EXN9 S51932 Cd3z 0 day neonate thymus cDNA RIKEN full-length enriched library clone:A430060O20 product:CD3 antigen zeta polypeptide full insert sequence.
chr1 167706184 167706190 - miR-26 10 3 PEAK605 3UTR EXN9 S51932 Cd3z 0 day neonate thymus cDNA RIKEN full-length enriched library clone:A430060O20 product:CD3 antigen zeta polypeptide full insert sequence.
chr1 167707129 167707135 - miR-9 4 3 PEAK606 3UTR EXN8 AK138774 Cd3z 0 day neonate thymus cDNA RIKEN full-length enriched library clone:A430060O20 product:CD3 antigen zeta polypeptide full insert sequence.
chr1 167710023 167710030 - miR-15 8 5 PEAK608
chr1 174033538 174033544 - miR-9 10 4 PEAK640 3UTR EXN4 NM_011063 Pea15 phosphoprotein enriched in astrocytes 15 isoform
chr1 174033863 174033869 - miR-26 4 3 PEAK641 3UTR EXN4 NM_011063 Pea15 phosphoprotein enriched in astrocytes 15 isoform
chr1 174034082 174034088 - miR-193 18 4 PEAK642 3UTR EXN4 NM_011063 Pea15 phosphoprotein enriched in astrocytes 15 isoform
chr1 167710033 167710039 - miR-27 8 5 PEAK608
chr1 178856864 178856871 - miR-181 7 5 PEAK718 3UTR EXN18 NM_029756 Sdccag8 centrosomal colon cancer autoantigen
chr1 20920137 20920144 + let-7 6 2 PEAK27 CDS EXN3 NM_028829 Paqr8 progestin and adipoQ receptor family member
chr1 20921070 20921076 + miR-344 5 3 PEAK28 3UTR EXN3 NM_028829 Paqr8 progestin and adipoQ receptor family member
chr1 20921349 20921356 + miR-221 17 5 PEAK29 3UTR EXN3 NM_028829 Paqr8 progestin and adipoQ receptor family member
chr1 20921357 20921364 + miR-9 17 5 PEAK29 3UTR EXN3 NM_028829 Paqr8 progestin and adipoQ receptor family member
chr1 167706149 167706155 - miR-15 10 3 PEAK605 3UTR EXN9 S51932 Cd3z 0 day neonate thymus cDNA RIKEN full-length enriched library clone:A430060O20 product:CD3 antigen zeta polypeptide full insert sequence.
chr1 167703845 167703853 - miR-9 6 4 PEAK604 CDS ITN8 S51932 Cd3z 0 day neonate thymus cDNA RIKEN full-length enriched library clone:A430060O20 product:CD3 antigen zeta polypeptide full insert sequence.
chr1 16982662 16982668 - miR-124 2 2 PEAK25
chr1 79315630 79315637 - miR-9 6 2 PEAK253 CDS EXN2 BC048249 Scg2 Secretogranin-2 precursor (Secretogranin II) (SgII) (Chromogranin C) [Contains: Secretoneurin (SN)].
chr1 79315615 79315621 - miR-153 6 2 PEAK253 CDS EXN2 BC048249 Scg2 Secretogranin-2 precursor (Secretogranin II) (SgII) (Chromogranin C) [Contains: Secretoneurin (SN)].
chr1 22759939 22759947 - miR-153 5 3 PEAK39
chr1 22759931 22759937 - miR-34 5 3 PEAK39
chr1 78300542 78300548 - miR-181 2 2 PEAK248 CDS EXN5 NM_001004173 Sgpp2 sphingosine-1-phosphate phosphotase 2
chr1 78300546 78300553 - miR-19 2 2 PEAK248 CDS EXN5 NM_001004173 Sgpp2 sphingosine-1-phosphate phosphotase 2
chr1 165790581 165790587 - miR-34 2 1 PEAK581 CDS ITN25 AK141661 Scyl3 9 days embryo whole body cDNA RIKEN full-length enriched library clone:D030013A14 product:hypothetical Short-chain dehydrogenase/reductase SDR containing protein full insert sequence.
chr1 22438941 22438948 - miR-9 4 3 PEAK38
chr1 22422548 22422554 - miR-181 4 3 PEAK37
chr1 22358641 22358647 - miR-344 3 3 PEAK36
chr1 22358626 22358632 - miR-27 3 3 PEAK36
chr1 22358669 22358675 - miR-30 3 3 PEAK36
chr1 20921397 20921404 + miR-34 12 5 PEAK30 3UTR EXN3 NM_028829 Paqr8 progestin and adipoQ receptor family member
chr1 174220543 174220549 + miR-344 5 3 PEAK684
chr1 16214781 16214787 - miR-26 2 2 PEAK22 3UTR EXN13 AF459100 Stau2 Double-stranded RNA-binding protein Staufen homolog 2.
chr1 65198640 65198647 + miR-124 8 4 PEAK178
chr1 137118378 137118384 - miR-124 7 3 PEAK453 CDS EXN6 NM_011590 Timm17a translocator of inner mitochondrial membrane
chr1 137118368 137118375 - miR-193 7 3 PEAK453 CDS EXN6 NM_011590 Timm17a translocator of inner mitochondrial membrane
chr1 137118084 137118090 - miR-181 4 3 PEAK452 3UTR EXN6 NM_011590 Timm17a translocator of inner mitochondrial membrane
chr1 7160340 7160346 + miR-30 6 3 PEAK13 3UTR EXN3 AK161921 Pcmtd1 Adult male olfactory brain cDNA RIKEN full-length enriched library clone:6430407P10 product:hypothetical protein full insert sequence.
chr1 138444600 138444606 + miR-181 5 3 PEAK467 3UTR EXN2 NM_177643 Zfp281 zinc finger protein 281
chr1 65208137 65208143 + miR-9 4 3 PEAK179
chr1 65208153 65208159 + miR-27 4 3 PEAK179
chr1 16214776 16214782 - miR-344 2 2 PEAK22 3UTR EXN13 AF459100 Stau2 Double-stranded RNA-binding protein Staufen homolog 2.
chr1 179287361 179287367 + miR-30 27 5 PEAK734 3UTR EXN1 NM_013915 Zfp238 zinc finger protein 238 isoform 2
chr1 179287401 179287407 + miR-27 27 5 PEAK734 3UTR EXN1 NM_013915 Zfp238 zinc finger protein 238 isoform 2
chr1 137118055 137118062 - miR-9 4 3 PEAK452 3UTR EXN6 NM_011590 Timm17a translocator of inner mitochondrial membrane
chr1 37389006 37389012 - miR-26 6 4 PEAK88 3UTR EXN15 AK163327 Mgat4a 2 cells egg cDNA RIKEN full-length enriched library clone:B020014J19 product:mannoside acetylglucosaminyltransferase 4 isoenzyme A full insert sequence.
chr1 82630694 82630700 + miR-221 7 4 PEAK259 CDS EXN5 BC016597 5230400G24Rik 5230400G24Rik protein.
chr1 82630692 82630698 + miR-101 7 4 PEAK259 CDS EXN5 BC016597 5230400G24Rik 5230400G24Rik protein.
chr1 174220580 174220587 + miR-21 5 3 PEAK684
chr1 4883539 4883547 + miR-9 4 4 PEAK5 CDS EXN8 BC083127 Tcea1 Transcription elongation factor A protein 1 (Transcription elongation factor S-II protein 1) (Transcription elongation factor TFIIS.o).
chr1 4883552 4883559 + miR-125 4 4 PEAK5 CDS EXN8 BC083127 Tcea1 Transcription elongation factor A protein 1 (Transcription elongation factor S-II protein 1) (Transcription elongation factor TFIIS.o).
chr1 95459498 95459504 - miR-344 6 3 PEAK345 CDS EXN3 NM_021537 Stk25 serine/threonine kinase 25
chr1 95459493 95459499 - miR-27 6 3 PEAK345 CDS EXN3 NM_021537 Stk25 serine/threonine kinase 25
chr1 95452537 95452543 - miR-138 5 4 PEAK344 3UTR EXN12 NM_021537 Stk25 serine/threonine kinase 25
chr1 95452534 95452540 - miR-125 5 4 PEAK344 3UTR EXN12 NM_021537 Stk25 serine/threonine kinase 25
chr1 53701844 53701850 - miR-19 3 3 PEAK123 3UTR EXN8 NM_133810 Stk17b serine/threonine kinase 17b
chr1 4883630 4883636 + miR-17 6 4 PEAK6 CDS EXN8 BC083127 Tcea1 Transcription elongation factor A protein 1 (Transcription elongation factor S-II protein 1) (Transcription elongation factor TFIIS.o).
chr1 4885064 4885071 + miR-181 4 2 PEAK7 CDS EXN9 BC083127 Tcea1 Transcription elongation factor A protein 1 (Transcription elongation factor S-II protein 1) (Transcription elongation factor TFIIS.o).
chr1 137118392 137118398 - miR-344 7 3 PEAK453 CDS EXN6 NM_011590 Timm17a translocator of inner mitochondrial membrane
chr1 137118383 137118389 - miR-193 7 3 PEAK453 CDS EXN6 NM_011590 Timm17a translocator of inner mitochondrial membrane
chr1 53701799 53701805 - miR-30 3 3 PEAK123 3UTR EXN8 NM_133810 Stk17b serine/threonine kinase 17b
chr1 82630706 82630712 + miR-15 7 4 PEAK259 CDS EXN5 BC016597 5230400G24Rik 5230400G24Rik protein.
chr1 4883653 4883660 + miR-181 6 4 PEAK6 CDS ITN8 BC083127 Tcea1 Transcription elongation factor A protein 1 (Transcription elongation factor S-II protein 1) (Transcription elongation factor TFIIS.o).
chr1 52653603 52653609 - miR-344 2 2 PEAK120 CDS EXN2 AK035995 2210010L05Rik 10 days neonate medulla oblongata cDNA RIKEN full-length enriched library clone:B830038L24 product:hypothetical protein full insert sequence.
chr1 37389099 37389105 - miR-101 8 5 PEAK89 3UTR EXN15 AK163327 Mgat4a 2 cells egg cDNA RIKEN full-length enriched library clone:B020014J19 product:mannoside acetylglucosaminyltransferase 4 isoenzyme A full insert sequence.
chr1 37389115 37389122 - let-7 8 5 PEAK89 3UTR EXN15 NM_173870 Mgat4a mannoside acetylglucosaminyltransferase 4
chr1 37389108 37389114 - miR-26 8 5 PEAK89 3UTR EXN15 NM_173870 Mgat4a mannoside acetylglucosaminyltransferase 4
chr1 37389124 37389131 - miR-26 8 5 PEAK89 3UTR EXN15 NM_173870 Mgat4a mannoside acetylglucosaminyltransferase 4
chr1 37393673 37393681 - miR-9 4 3 PEAK91 CDS EXN13 NM_173870 Mgat4a mannoside acetylglucosaminyltransferase 4
chr1 37393682 37393688 - miR-9 4 3 PEAK91 CDS EXN13 NM_173870 Mgat4a mannoside acetylglucosaminyltransferase 4
chr1 179285402 179285408 + miR-344 5 3 PEAK726 3UTR EXN1 NM_013915 Zfp238 zinc finger protein 238 isoform 2
chr1 179285258 179285264 + miR-708 11 4 PEAK725 CDS EXN1 NM_013915 Zfp238 zinc finger protein 238 isoform 2
chr1 179285242 179285249 + miR-27 11 4 PEAK725 CDS EXN1 NM_013915 Zfp238 zinc finger protein 238 isoform 2
chr1 169215033 169215039 - miR-15 7 3 PEAK613 CDS EXN2 NM_025569 Mgst3 microsomal glutathione S-transferase 3
Page 10 of 157 Showing rows 901 - 1000 (15664 total)
<   | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10   >   Next Block

Get the whole table